RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tspyl1O88852 379 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Odc1P00860 461 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 NapbP28663 298 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Gstp2P46425 210 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 NrgnP60761 78 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Fads2p1Q0VAX3 487 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Znf148Q61624 794 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 MelkQ61846 643 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Ces5aQ6AW46 575 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Dtx4Q6PDK8 616 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Ddx55Q6ZPL9 600 aaKnown RBP8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Bpifb9aQ80XI7 591 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 BsxQ810B3 232 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Timm29Q8BGX2 266 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Ahsa1Q8BK64 338 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Cgrrf1Q8BMJ7 332 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Parp12Q8BZ20 711 aaKnown RBP8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Hdac7Q8C2B3 938 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Alkbh6Q8K2U2 238 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Glis2Q8VDL9 521 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Sav1Q8VEB2 386 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Golph3Q9CRA5 298 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 S100a14Q9D2Q8 104 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Dnase1l1Q9D7J6 314 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 NplQ9DCJ9 320 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Inpp5eQ9JII1 647 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Itga2bQ9QUM0 1033 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 Capn7Q9R1S8 813 aa8.82□□□□□ -1
Upf3b-201ENSMUST00000076265 1700003F12RikA2AKE5 210 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Serpinb6eI7HJI3 429 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Pcdh12O55134 1180 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Top3aO70157 1003 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 AldoaP05064 364 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Vps4bP46467 444 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 OgdhQ60597 1023 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Lcp1Q61233 627 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyth4Q80YW0 393 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 NrcamQ810U4 1256 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Dirc2Q8BFQ6 478 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Mageb18Q8BQR7 327 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Steap2Q8BWB6 489 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Slc39a11Q8BWY7 342 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Tnfsfm13Q8BXS2 410 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Btbd9Q8C726 612 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Kdm1bQ8CIG3 826 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Vmn1r193Q8R258 319 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Foxe1Q8R2I0 371 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr1052Q8VGR8 312 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Rab4bQ91ZR1 213 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Serpinb11Q9CQV3 388 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmem208Q9CR96 173 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Kdm8Q9CXT6 414 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Rnf146Q9CZW6 359 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Lsm12Q9D0R8 195 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Fbxl17Q9QZN1 701 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 4931408C20RikE9PWP9 1381 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 EvplQ9D952 2035 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Zfp646Q6NV66 1788 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Btbd35f15A0A087WR44 498 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Btbd35f12A0A0A0MQP3 498 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm13119B1ARV5 481 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Btbd35f13B8JKF6 498 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Zfp384E9Q1A5 584 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Itga10E9Q6R1 1167 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Vmn2r3H3BJ88 915 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Sult2a5K7N6K9 285 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Unc5cO08747 931 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 DdtO35215 118 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Lhx8O35652 367 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 RhoP15409 348 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Bmp6P20722 510 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Pou3f1P21952 449 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Adam8Q05910 826 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 PjvkQ0ZLH2 352 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Wdr36Q3TAQ9 899 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Clec12aQ504P2 267 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Abcg1Q64343 666 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Tas2r115Q7M719 310 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Hmgxb4Q80Y32 594 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Slitrk1Q810C1 696 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Kctd3Q8BFX3 815 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Mospd3Q8BGG6 235 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Spata33Q8C624 132 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Rmnd1Q8CI78 450 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Actr1bQ8R5C5 376 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr460Q8VF31 314 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 BaatQ91X34 420 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Gps1Q99LD4 471 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Tnpo2Q99LG2 887 aaKnown RBP8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Rnf135Q9CWS1 417 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Tssk4Q9D411 328 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 MeiobQ9D513 470 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Sult1c2Q9D939 296 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Tpk1Q9R0M5 243 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Ly6iQ9WU67 134 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 B3galt4Q9Z0F0 371 aa8.81□□□□□ -1
Upf3b-201ENSMUST00000076265 Trim30bE9PVL6 203 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Fam170bE9PXT9 378 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Prss56F2YMG0 604 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Tnfrsf11aO35305 625 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms