RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Upk3bl1Q9D701 249 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyp3a44Q9EQW4 504 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyhr1Q9QXA1 311 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ccnb1ip1D3Z3K2 276 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rpl3lE9PWZ3 407 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Atxn2O70305 1285 aaKnown RBP9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 AldocP05063 363 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CtskP55097 329 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CidecP56198 239 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rps3aP97351 264 aaKnown RBP9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Smim24Q0VG18 120 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 C2cd4cC2CD4Q5HZI2 419 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Map4k2Q61161 821 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pdcd4Q61823 469 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cox8aQ64445 69 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Txndc15Q6P6J9 344 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kctd5Q8VC57 234 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Adgre4Q91ZE5 689 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dhrs4Q99LB2 279 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Lsm7Q9CQQ8 103 aaKnown RBP9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Uqcc2Q9CQY6 136 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Q9D454 513 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc6a14Q9JMA9 638 aa9.48□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Casp8ap2Q9WUF3 1962 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Igkv5-45A0A0B4J1J1 115 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zcchc7B1AX39 541 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cped1B2RX70 1026 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm28048F7BCN0 99 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyp8b1O88962 500 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 LckP06240 509 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 HmgclP38060 325 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 PtnP63089 168 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hdac2P70288 488 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 IgfalsP70389 603 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Coq7P97478 217 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tmem181aQ3U3W2 474 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Esrp1Q3US41 680 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 SynaQ5G5D5 617 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc10a7Q5PT53 340 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Adam39Q7M762 756 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 AptxQ7TQC5 342 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Psmd11Q8BG32 422 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gpr171Q8BG55 319 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Krr1Q8BGA5 380 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tmem214Q8BM55 687 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Glt28d2Q8BML3 165 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Grsf1Q8C5Q4 479 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Clec4a3Q8JZX6 237 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fam129bQ8R1F1 749 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Art3Q8R2G4 371 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 NrmQ8VC65 262 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dlg2Q91XM9 852 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pdzd3Q99MJ6 498 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Trappc5Q9CQA1 188 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Apbb2Q9DBR4 760 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Il21Q9ES17 146 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Khdrbs3Q9R226 346 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Btnl4A2CG29 586 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tsc22d2E9Q7M2 769 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Stc1O55183 247 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Sox6P40645 827 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 DckP43346 260 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc26a1P58735 704 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ms4a15Q3UPL6 245 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zfp868Q3UTQ6 422 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dnajc11Q5U458 559 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rcor1Q8CFE3 480 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dnajc27Q8CFP6 273 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Sirt3Q8R104 334 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Vmn1r198Q8R263 300 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ppp1r14cQ8R4S0 164 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Use1Q9CQ56 270 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tmem9Q9CR23 183 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zswim1Q9CWV7 455 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tspan11Q9D1D1 253 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kat8Q9D1P2 458 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 MispQ9D279 648 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Wdr53Q9DB94 358 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Armc8Q9DBR3 673 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Krt81Q9ERE2 481 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 RgrQ9Z2B3 291 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm13040A2A8C4 496 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm13119B1ARV5 481 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Alox12P39655 663 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Lad1P57016 528 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Btbd1P58544 488 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zc3hav1Q3UPF5 946 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Arhgef38Q80VK6 770 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gjc2Q8BQU6 440 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ikzf5Q8BU00 419 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mcfd2Q8K5B2 145 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Nrif1Q923B3 828 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Q9CPZ3 230 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ndel1Q9ERR1 345 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mkrn2Q9ERV1 416 aaKnown RBP9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hapln2Q9ESM3 341 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fgf22Q9ESS2 162 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cacng3Q9JJV5 315 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ehd3Q9QXY6 535 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cldn7Q9Z261 211 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms