RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Kcnk10Q8BUW1 535 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 ReltQ8BX43 436 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Itpk1Q8BYN3 419 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 BtdQ8CIF4 520 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Neto1Q8R4I7 533 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 DhrsxQ8VBZ0 335 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 DeraQ91YP3 318 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tmem135Q9CYV5 458 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Hacl1Q9QXE0 581 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Acss2Q9QXG4 701 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm17190V9GX38 357 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Espl1P60330 2118 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm43796A0A0J9YV32 372 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Clk3O35492 638 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Syt4P40749 425 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tbc1d24Q3UUG6 561 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cdkn2cQ60772 168 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Sqstm1Q64337 442 aaKnown RBP11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 St8sia4Q64692 359 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Mgat4bQ812F8 548 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ldhal6bQ8BVP2 382 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Lrrc56Q8K375 552 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 NrmQ8VC65 262 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr441Q8VFS5 310 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gadd45gip1Q9CR59 222 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Pidd1Q9ERV7 915 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fbxo17Q9QZM8 286 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 ArntlQ9WTL8 632 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm5565A0A0G2JGB2 317 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 PpigA2AR02 752 aaKnown RBP11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Krt28A6BLY7 462 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Vmn2r112L7N221 857 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 MaptP10637 733 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Scg5P12961 212 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Bmp4P21275 408 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Apobec1P51908 229 aaKnown RBP11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Pdx1P52946 284 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Dppa5bP85965 119 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ptpn2Q06180 406 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Larp4bQ6A0A2 741 aaKnown RBP11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Defb34Q7TNV8 81 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ly6g5cQ8K1T5 149 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Mterf3Q8R3J4 412 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr541Q8VGM0 312 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Zfp65Q91W94 390 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Aar2Q9D2V5 384 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fezf2Q9ESP5 455 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Pdzk1Q9JIL4 519 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Panx1Q9JIP4 426 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 HgfacQ9R098 653 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Mapk11Q9WUI1 364 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Catsperg2C6KI89 1145 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 TspearJ3S6Y1 670 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gon7P0C8B4 98 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Srp54P14576 504 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Dnaja1P63037 397 aaKnown RBP11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ica1P97411 478 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ccdc185Q3V118 621 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gm2aQ60648 193 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cldn11Q60771 207 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Spon1Q8VCC9 807 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Q922R1 422 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ing1Q9QXV3 279 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fkbp9Q9Z247 570 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Adgra2Q91ZV8 1336 aa11.04□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr1247A2AT78 314 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Spats1A2RRY8 269 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Tex16F6WNY1 1150 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gtf2h4O70422 463 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Eno2P17183 434 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 StacP97306 403 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Sox14Q04892 240 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Rbm15Q0VBL3 962 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Plk5Q4FZD7 595 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cdh12Q5RJH3 794 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Cfap97Q6ZPR1 541 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Insig1Q8BGI3 259 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 HnrnpllQ921F4 591 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 SgshQ9EQ08 502 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gtf2h2Q9JIB4 396 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Sppl2cA2A6C4 690 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Zfr2E9Q5M4 874 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Usp2O88623 613 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Csf2P01587 141 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Surf2P09926 257 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 DcnP28654 354 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Gpat2Q14DK4 801 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Krt76Q3UV17 594 aaKnown RBP11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Zfp658Q5PPQ4 887 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 ToxQ66JW3 526 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Snx31Q6P8Y7 439 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Syt14Q7TN84 555 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 A730061H03RikQ8BGD2 154 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Slco2b1Q8BXB6 683 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Fmo2Q8K2I3 535 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Ces2aQ8QZR3 558 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr697Q8VFM4 317 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Olfr1346Q8VGH6 313 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 Uckl1Q91YL3 548 aa11.03□□□□□ -0.64
Topbp1-201ENSMUST00000035164 MrgpreQ91ZB7 310 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms