RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Pcdhga6Q91XY2 932 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 PyurfQ9D1C3 112 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Fundc2Q9D6K8 151 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Kcnq4Q9JK97 696 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Slamf1Q9QUM4 343 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Gm5724L7N264 670 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Coro1aO89053 461 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Btg1-ps1Q3V0S2 161 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Btg1-ps2Q3V0X0 161 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Cand1Q6ZQ38 1230 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Dhrs7bQ99J47 323 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 MvdQ99JF5 401 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Cryl1Q99KP3 319 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Nxnl2Q9D531 156 aa22.64■■□□□ 1.22
Sh3rf1-201ENSMUST00000034060 Fibcd1A2AV25 459 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 ItpkbB2RXC2 942 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Gnb5P62881 395 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Slc22a15Q504N2 544 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Pea15Q62048 130 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Uhrf2Q7TMI3 803 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Faim2Q8K097 317 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Atat1Q8K341 421 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Slc38a4Q8R1S9 547 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Sntg1Q925E1 517 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Vsig1Q9D2J4 407 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Ighv11-2A0A075B5R8 117 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Nsg2P47759 171 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Cpt2P52825 658 aaKnown RBP22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Kirrel1Q80W68 789 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Aimp2Q8R010 320 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Cyp4a29A0A087WPC3 509 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Pcdhgb8A0A140LI48 931 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Hsd17b14E9Q3D4 273 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 WasP70315 520 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 S100a15aQ6S5I3 108 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Pcp4l1Q6W8Q3 68 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Fam76bQ80XP8 339 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Atg10Q8R1P4 215 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Fbxl20Q9CZV8 436 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Gm17190V9GX38 357 aa22.64■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Rex2A2AWF2 685 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Zfp791Q497V9 528 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Nxf3Q4ZGD9 553 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Slc25a51Q5HZI9 298 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Hacl1Q9QXE0 581 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Fv4P11370 679 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Armc5Q5EBP3 926 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Spata48Q5NC83 441 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Trmt10aQ8C1Z8 328 aaKnown RBP22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Marc2Q922Q1 338 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 AllcQ9JHX6 414 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 PpieQ9QZH3 301 aaKnown RBP22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Agtr2P35374 363 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Brcc3P46737 291 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Klrg2Q3UM83 387 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Dalrd3Q6PJN8 538 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Armc4B2RY50 1037 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Mmp10O55123 476 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 TktP40142 623 aaKnown RBP22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Foxr1Q3UTB7 268 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Xkr4Q5GH67 647 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Coro2bQ8BH44 480 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Sult1c2Q9D939 296 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Ndst3Q9EQH7 873 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Vps29Q9QZ88 182 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Slit3Q9WVB4 1523 aa22.63■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Npc1O35604 1277 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 StradaQ3UUJ4 431 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Trcg1Q58Y74 825 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Olfr1288Q7TQY0 312 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Gm42372A0A1B0GT27 204 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Tex16F6WNY1 1150 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 IduaP48441 634 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Ddx6P54823 483 aaKnown RBP22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Art5P70352 309 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Yes1Q04736 541 aaKnown RBP22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Calm5Q6W3E0 140 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Slc15a4Q91W98 574 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 PtgfrnQ9WV91 879 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Vmn2r103E9PWW0 856 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Brd7O88665 651 aaKnown RBP22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Itgb1P09055 798 aaKnown RBP22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Pxmp2P42925 194 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Alg11Q3TZM9 492 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 GnalQ8CGK7 381 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Dnajc18Q9CZJ9 357 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Dcdc2cQ9D1B8 347 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Olfr1480A0A140LIR8 359 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Gm16434J3QN10 205 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 4930555G01RikL7N253 205 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Cpa6Q5U901 438 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Metap1dQ9CPW9 335 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Atad1Q9D5T0 361 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 GhrlQ9EQX0 117 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Adgrb1Q3UHD1 1582 aa22.62■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Sec14l5B2RXM5 696 aa22.61■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 C1qbP14106 253 aa22.61■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Il6stQ00560 917 aa22.61■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Emx2Q04744 253 aa22.61■■□□□ 1.21
Sh3rf1-201ENSMUST00000034060 Olfr616Q3KPB0 317 aa22.61■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms