RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Aff3P51827 1254 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Cntn5P68500 1098 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Itgb8Q0VBD0 767 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 A1bgQ19LI2 512 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Prss36Q5K2P8 849 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Lemd2Q6DVA0 511 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Rab39aQ8BHD0 217 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 PdhxQ8BKZ9 501 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Steap3Q8CI59 488 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn1r33Q8R2E0 305 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Man2c1Q91W89 1039 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Mrgpra2Q91WW4 305 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 PpidQ9CR16 370 aaKnown RBP15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Zswim1Q9CWV7 455 aaKnown RBP15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Tmed10Q9D1D4 219 aaKnown RBP15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 MylkQ6PDN3 1941 aaKnown RBP15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 HttP42859 3119 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Slc43a3A2AVZ9 502 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Zfp952B0V2W4 504 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm20431E9PY39 371 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Cyp2j8G3UZ38 503 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Sh3yl1O08641 340 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Il1rnP25085 178 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 TfamP40630 243 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Arhgap39P59281 1107 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 MybphP70402 483 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Vipr1P97751 459 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr381Q5SSP0 311 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Cd6Q61003 665 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Bcl2l1Q64373 233 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 PdprQ7TSQ8 878 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Retreg1dQ8VE91 480 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 DgkgQ91WG7 788 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 PyurfQ9D1C3 112 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Dusp6Q9DBB1 381 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm43796A0A0J9YV32 372 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Ttc23lA6H6E9 458 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Zfp362B1ASA5 418 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn2r22E9Q7S8 853 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Grk4O70291 574 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Cyp8b1O88962 500 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Orm2P07361 207 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Tead2P48301 445 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Hpcal1P62748 193 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Cxcr5Q04683 374 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Tbc1d24Q3UUG6 561 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Rnf43Q5NCP0 784 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Pwwp2aQ69Z61 730 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Tmem270Q6UJB9 264 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Defb14Q7TNV9 67 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Dsg1bQ7TSF1 1060 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Adgrd1Q80T32 903 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Mettl3Q8C3P7 580 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Ccdc17Q8CE13 565 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Rnf219Q8K2Y0 722 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 LzicQ8K3C3 190 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 RorbQ8R1B8 470 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Rsph1Q8VIG3 301 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Pcdhga11Q91XY8 933 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Coro6Q920M5 471 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 RragcQ99K70 398 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Ankra2Q99PE2 312 aa15.98■□□□□ 0.15
Shh-201ENSMUST00000002708 Fam46dB1ATX6 390 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 EXOC1LB9EK06 172 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Tsga10ipF7A1F0 157 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm19965J3QNY8 723 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm6337K7N6X9 211 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm3115L7N285 211 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Elovl3O35949 271 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Slc22a2O70577 553 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 P01665 111 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 P01666 111 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gstm1P10649 218 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 PahP16331 453 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Slc6a11P31650 627 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Ptpn2Q06180 406 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Rbm15Q0VBL3 962 aaKnown RBP15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Cdkl4Q3TZA2 342 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Q6PAC4 1279 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Galnt2Q6PB93 570 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Nod1Q8BHB0 953 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 SgtaQ8BJU0 315 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gk5Q8BX05 534 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Dnajc27Q8CFP6 273 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Abtb1Q99LJ2 478 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Pdzd3Q99MJ6 498 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 PgdQ9DCD0 483 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Galk1Q9R0N0 392 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Zbtb18Q9WUK6 522 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Igkv12-46A0A140T8P6 115 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Mllt3A2AM29 569 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm10800D3Z496 220 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm6811E9Q3Y8 510 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Rgs4O08899 205 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Scamp3O35609 349 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Kcnn4O89109 425 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 F2P19221 618 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Aldh1a1P24549 501 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Serpina3cP29621 417 aa15.97■□□□□ 0.15
Shh-201ENSMUST00000002708 Adamts8P57110 905 aa15.97■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms