RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tmem121Q80XA0 318 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fam76bQ80XP8 339 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slfnl1Q8BHW9 410 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lrch3Q8BVU0 778 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Akr1c18Q8K023 323 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 WrbQ8K0D7 174 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr677Q8VF06 312 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tram1Q91V04 374 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc24a3Q99PD7 645 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dnase1l2Q9D1G0 278 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 DstnQ9R0P5 165 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cldn34b1B1AZQ8 209 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Vmn2r17E9PYF5 849 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rem1O35929 297 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pdlim1O70400 327 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 ChrndP02716 520 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 AlplP09242 524 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Brcc3P46737 291 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fscn2Q32M02 492 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Znf583Q3V080 568 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ei24Q61070 340 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zc3h11aQ6NZF1 792 aaKnown RBP8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Svs1Q6WIZ7 820 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ube2q1Q7TSS2 422 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc36a2Q8BHK3 478 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Nlgn3Q8BYM5 825 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Barhl2Q8VIB5 384 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 CrebzfQ91ZR3 358 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Chmp1aQ921W0 196 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fars2Q99M01 451 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cldn34b2Q9D9N2 209 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dio2Q9Z1Y9 266 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 H2afb1S4R1E0 115 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 H2afb3S4R1G7 115 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Arap3Q8R5G7 1538 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Zfp600A2A7V0 737 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Aldoart1A6ZI46 419 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ebf2O08792 575 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Bnip2O54940 326 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pold1P52431 1105 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 StacP97306 403 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 GapdhsQ64467 440 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Slc39a10Q6P5F6 833 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Tas2r136Q7TQA8 305 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Abhd13Q80UX8 337 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Npas4Q8BGD7 802 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Elp6Q8BK75 266 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Adgrg7Q8BM96 785 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Q8BR90 294 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 RhdQ8CF94 418 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ccm2Q8K2Y9 453 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Traf3ip2Q8N7N6 555 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gspt1Q8R050 636 aaKnown RBP8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Arl6ip5Q8R5J9 188 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ndc1Q8VCB1 673 aaKnown RBP8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Fads1Q920L1 447 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Nudt17Q9CWD3 296 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 9230104L09RikQ9D264 133 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 4933421I07RikQ9D420 214 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ndst3Q9EQH7 873 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 B4galt5Q9JMK0 388 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pex14Q9R0A0 376 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 4930402K13RikB1AW18 415 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cd70O55237 195 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 DxoO70348 397 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 EporP14753 507 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Tacr2P30549 384 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 AcadvlP50544 656 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Fubp3Q3TIX6 575 aaKnown RBP8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Sez6l2Q4V9Z5 910 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Stxbp5lQ5DQR4 1185 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Arl5cQ6P068 179 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gpr156Q6PCP7 798 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Slc46a2Q8CA03 479 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Aimp2Q8R010 320 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gtf2f2Q8R0A0 249 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Olfr371Q8VGB8 312 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Olfr570Q8VH12 312 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Nck1Q99M51 377 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Uck2Q99PM9 261 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 PrebQ9WUQ2 417 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ggt5Q9Z2A9 573 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cep170bQ80U49 1574 aa8.96□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm5565A0A0G2JGB2 317 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Olfr671A0A1B0GSN5 317 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Kcnj5P48545 419 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Entpd1P55772 510 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Glycam1Q02596 151 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Emx2Q04744 253 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Bpifb1Q61114 474 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gata6Q61169 589 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pamr1Q8BU25 720 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Kdelr3Q8R1L4 214 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Atg10Q8R1P4 215 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 CtbsQ8R242 366 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Olfr165Q8VFA2 313 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Dhx36Q8VHK9 1001 aaKnown RBP8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Bcas2Q9D287 225 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Usp12Q9D9M2 370 aa8.95□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Znf354bQ9QXT9 601 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms