RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ABRAXAS1Q6UWZ7 409 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 GJD3Q8N144 294 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 MIER2Q8N344 545 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 CAMKK1Q8N5S9 505 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 NUDT8Q8WV74 236 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 SLC5A11Q8WWX8 675 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 CLPTM1LQ96KA5 538 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 NECAB3Q96P71 396 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-232ENST00000641947 NPAS2Q99743 824 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ACAT2Q9BWD1 397 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ACTL8Q9H568 366 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 SPATA7Q9P0W8 599 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ZNF624Q9P2J8 865 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ICKQ9UPZ9 632 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 VPS13AQ96RL7 3174 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 H0YHG0 523 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 H0YIV9 168 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 AIM2O14862 343 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 NDUFS2O75306 463 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 RASSF9O75901 435 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 MAOBP27338 520 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 PKLRP30613 574 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 ACADVLP49748 655 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 STX1BP61266 288 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 UFM1P61960 85 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 MEF2AQ02078 507 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-232ENST00000641947 EMX2Q04743 252 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 KIAA0040Q15053 153 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 LCTLQ6UWM7 567 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 OR52E1Q8NGJ3 308 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 JPH3Q8WXH2 748 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-232ENST00000641947 SLC52A3Q9NQ40 469 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 GEMIN8Q9NWZ8 242 aaKnown RBP16.98■□□□□ 0.31
PHGDH-232ENST00000641947 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
PHGDH-232ENST00000641947 TAC3Q9UHF0 121 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 PCOLCE2Q9UKZ9 415 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 DYRK1BQ9Y463 629 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 DMDP11532 3685 aa16.98■□□□□ 0.31
PHGDH-232ENST00000641947 MDC1Q14676 2089 aaKnown RBP16.98■□□□□ 0.31
PHGDH-232ENST00000641947 SERTM1A2A2V5 107 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 BDP1A6H8Y1 2624 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 G6PDP11413 515 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 CDH1P12830 882 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SLC2A4P14672 509 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 IL12AP29459 219 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 NUDT1P36639 197 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 HNF4AP41235 474 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 CXCL12P48061 93 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 NUDT2P50583 147 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 ZXDAP98168 799 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 THEMIS2Q5TEJ8 643 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 IL23RQ5VWK5 629 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 ATG9BQ674R7 924 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 NXPE4Q6UWF7 544 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 WASH2PQ6VEQ5 465 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SFTPA2Q8IWL1 248 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 C10orf67Q8IYJ2 551 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 PPP3R2Q96LZ3 170 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 MTERF1Q99551 399 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 LRTM1Q9HBL6 345 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 WASH6PQ9NQA3 447 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 AASDHPPTQ9NRN7 309 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 CUEDC1Q9NWM3 386 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 TNRC6BQ9UPQ9 1833 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 MYO15AQ9UKN7 3530 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 CROCCQ5TZA2 2017 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SDK1Q7Z5N4 2213 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 A0A1W2PR77 199 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 ANKRD28O15084 1053 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 RSL1D1O76021 490 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 ETHE1O95571 254 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SNRPB2P08579 225 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 C1GALT1C1LP0DN25 315 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 CAPN3P20807 821 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 PRPH2P23942 346 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 CD27P26842 260 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 MAGEA9P43362 315 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 RAB28P51157 221 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 MNAT1P51948 309 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 RPL6Q02878 288 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 DDX39BQ13838 428 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SLBPQ14493 270 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 IMPG1Q17R60 797 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 PDCD4Q53EL6 469 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 FBXW10Q5XX13 1052 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 ZFAND4Q86XD8 727 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 ZNF740Q8NDX6 193 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 FAM13CQ8NE31 585 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 OR7G3Q8NG95 312 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 GPBAR1Q8TDU6 330 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 SETD7Q8WTS6 366 aaKnown RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 APIPQ96GX9 242 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 MAGEB10Q96LZ2 347 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-232ENST00000641947 MVB12BQ9H7P6 319 aa16.97■□□□□ 0.31
PHGDH-232ENST00000641947 TMEM131Q92545 1883 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 TRBV23OR9-2A0A075B6M9 112 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 PIPSLA2A3N6 862 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 NR5A2O00482 541 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms