RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SEC24DO94855 1032 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 CATP04040 527 aaKnown RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 MTHFRP42898 656 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 NRIP1P48552 1158 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 CDH15P55291 814 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 ADARB1P78563 741 aaKnown RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 ZNF33BQ06732 778 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 LSAMPQ13449 338 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 NAE1Q13564 534 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 DOC2AQ14183 400 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.55■□□□□ 0.246e-6■■■■□ 21.1
PHGDH-211ENST00000641213 OTUD3Q5T2D3 398 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 GPR180Q86V85 440 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 NXPE3Q969Y0 559 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 FAM120BQ96EK7 910 aaKnown RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 SLC47A1Q96FL8 570 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 MED8Q96G25 268 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 COQ10AQ96MF6 247 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 OR4K3Q96R72 315 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 EBPLQ9BY08 206 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 SLC27A6Q9Y2P4 619 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 COQ6Q9Y2Z9 468 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 PCDHGA11Q9Y5H2 935 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 H3BSA7 217 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 NPC1O15118 1278 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 CREG1O75629 220 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 ADH1CP00326 375 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 PDHA2P29803 388 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 VIPR2P41587 438 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 PON2Q15165 354 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 OR4F3Q6IEY1 312 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 NLRP8Q86W28 1048 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 KLHDC8AQ8IYD2 350 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 VN1R2Q8NFZ6 395 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 DTD2Q96FN9 168 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 MTERF1Q99551 399 aaKnown RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 SOX17Q9H6I2 414 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 VCX3AQ9NNX9 186 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 CEPT1Q9Y6K0 416 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 ATG2AQ2TAZ0 1938 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PRRT4C9JH25 899 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PRKD3O94806 890 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 BMP10O95393 424 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 SLC16A8O95907 504 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 RETP07949 1114 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PRPS1L1P21108 318 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 IMPA1P29218 277 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PBLDP30039 288 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 ARSFP54793 590 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 MSANTD1Q6ZTZ1 278 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 USP51Q70EK9 711 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PATL1Q86TB9 770 aaKnown RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 OFCC1Q8IZS5 231 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 TMIGD2Q96BF3 282 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PKP4Q99569 1192 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 DCAF13Q9NV06 445 aaKnown RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 SPATA6Q9NWH7 488 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PTTG2Q9NZH5 202 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 VPS29Q9UBQ0 182 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 DNAJB9Q9UBS3 223 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 UTS2RQ9UKP6 389 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 MAGED1Q9Y5V3 778 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 TRIM64A6NGJ6 449 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 TRIM64CA6NLI5 447 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 H0Y858 1186 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 RFXANKO14593 260 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 SOD1P00441 154 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PRNPP04156 253 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 KIR3DL1P43629 444 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 SLC6A11P48066 632 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 ALDH3A2P51648 485 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 HNRNPFP52597 415 aaKnown RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 MTAPQ13126 283 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 ZNF658BQ4V348 819 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 GRHL2Q6ISB3 625 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 PSRC1Q6PGN9 363 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 RBM23Q86U06 439 aaKnown RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 SYT12Q8IV01 421 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 OR56A3Q8NH54 315 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 NETO1Q8TDF5 533 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 NCLNQ969V3 563 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 TUBA8Q9NY65 449 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-211ENST00000641213 GULP1Q9UBP9 304 aa16.54■□□□□ 0.24
PHGDH-211ENST00000641213 KIF26AQ9ULI4 1882 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-211ENST00000641213 H0YAE9 185 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 H0YIV9 168 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 CST1P01037 141 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 ALPLP05186 524 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 MYCLP1P12525 358 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-211ENST00000641213 HLA-EP13747 358 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 HNF4AP41235 474 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 PCDH1Q08174 1060 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 DDX39BQ13838 428 aaKnown RBP16.53■□□□□ 0.24
PHGDH-211ENST00000641213 DAG1Q14118 895 aa16.53■□□□□ 0.24
PHGDH-211ENST00000641213 UGT8Q16880 541 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms