RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
GTF3A-209ENST00000640289 SLC6A12P48065 614 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 HSPA7P48741 367 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 HNMTP50135 292 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 SHC2P98077 582 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
GTF3A-209ENST00000640289 FOXM1Q08050 763 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 CASP8Q14790 479 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 GPR19Q15760 415 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 DEFB110Q30KQ9 67 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 SULT1C3Q6IMI6 304 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 FIGLAQ6QHK4 219 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 LCTLQ6UWM7 567 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 TRABD2AQ86V40 505 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 THOC6Q86W42 341 aaKnown RBP12.7□□□□□ -0.38
GTF3A-209ENST00000640289 CNPY4Q8N129 248 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 TMEM151AQ8N4L1 468 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 RNF31Q96EP0 1072 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 DPH7Q9BTV6 452 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 NRSN2Q9GZP1 204 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 C12orf65Q9H3J6 166 aaKnown RBP12.7□□□□□ -0.38
GTF3A-209ENST00000640289 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 ARGLU1Q9NWB6 273 aaPredicted RBP12.7□□□□□ -0.38
GTF3A-209ENST00000640289 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
GTF3A-209ENST00000640289 SLC22A14Q9Y267 594 aa12.7□□□□□ -0.38
GTF3A-209ENST00000640289 UNC13CQ8NB66 2214 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 CCDC189A1A4V9 331 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 LRRC14BA6NHZ5 514 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 SYCE1LA8MT33 242 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 WDR47O94967 919 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 TNFSF15O95150 251 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 GSTA1P08263 222 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 CDH1P12830 882 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 GFAPP14136 432 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 CREB1P16220 341 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 CCND1P24385 295 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 GABRA4P48169 554 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 AGTR2P50052 363 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 MC2RQ01718 297 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 SLC18A2Q05940 514 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 RTP5Q14D33 572 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 PFKFB4Q16877 469 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 CDKL4Q5MAI5 379 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
GTF3A-209ENST00000640289 TCAIMQ8N3R3 496 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 USP7Q93009 1102 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 FCRL4Q96PJ5 515 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 MRPL57Q9BQC6 102 aaKnown RBP12.69□□□□□ -0.38
GTF3A-209ENST00000640289 MRPL46Q9H2W6 279 aaKnown RBP12.69□□□□□ -0.38
GTF3A-209ENST00000640289 CENPHQ9H3R5 247 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 SLC39A1Q9NY26 324 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 EMCNQ9ULC0 261 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 PCDHGA8Q9Y5G5 932 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 AK5Q9Y6K8 562 aa12.69□□□□□ -0.38
GTF3A-209ENST00000640289 UQCRHLA0A096LP55 91 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 OR2A25A4D2G3 310 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 B4E171 279 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 TARM1B6A8C7 271 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 H7BY64 318 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 COPEO14579 308 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
GTF3A-209ENST00000640289 KLK8O60259 260 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 BRINP1O60477 761 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 CCNT2O60583 730 aaKnown RBP12.68□□□□□ -0.38
GTF3A-209ENST00000640289 CTSVO60911 334 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 GLRA3O75311 464 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 STK16O75716 305 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 CCNDBP1O95273 360 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 FKBP9O95302 570 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 CTSBP07858 339 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 UQCRHP07919 91 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 GGT5P36269 586 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 TSPAN7P41732 249 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 ABATP80404 500 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 TUBB3Q13509 450 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 COL9A2Q14055 689 aaPredicted RBP12.68□□□□□ -0.38
GTF3A-209ENST00000640289 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 ADCK2Q7Z695 626 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 PAQR7Q86WK9 346 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 C17orf64Q86WR6 236 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 PLD3Q8IV08 490 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 KLHDC8AQ8IYD2 350 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 DNAJC22Q8N4W6 341 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 GATA6Q92908 595 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 ZUFSPQ96AP4 578 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 ZNF501Q96CX3 271 aaPredicted RBP12.68□□□□□ -0.38
GTF3A-209ENST00000640289 NXPE2Q96DL1 559 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 PHF21BQ96EK2 531 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 TCTN2Q96GX1 697 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 PRAP1Q96NZ9 151 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 PLCD4Q9BRC7 762 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 CD244Q9BZW8 370 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 PCBD2Q9H0N5 130 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 FGF21Q9NSA1 209 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 DCDC2Q9UHG0 476 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms