RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PPP4R1Q8TF05 950 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 AGAP4Q96P64 663 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 MESP1Q9BRJ9 268 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 SEMA3GQ9NS98 782 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 IL1RAPL1Q9NZN1 696 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 SPATA7Q9P0W8 599 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 ZC3H7BQ9UGR2 993 aaKnown RBP16.11■□□□□ 0.17
SMN2-216ENST00000638794 NOVA2Q9UNW9 492 aaKnown RBP16.11■□□□□ 0.17
SMN2-216ENST00000638794 ZKSCAN5Q9Y2L8 839 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 CELSR2Q9HCU4 2923 aa16.11■□□□□ 0.17
SMN2-216ENST00000638794 SVILO95425 2214 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 TCRBV7S3A2A0A539 114 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 WIPF3A6NGB9 483 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 MATN4O95460 622 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 FGGP02679 453 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 TPSB2P20231 275 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 TPSAB1Q15661 275 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.1■□□□□ 0.17
SMN2-216ENST00000638794 IRAK1BP1Q5VVH5 260 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 LRRC8BQ6P9F7 803 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 SDCCAG8Q86SQ7 713 aaPredicted RBP16.1■□□□□ 0.17
SMN2-216ENST00000638794 MAGEC3Q8TD91 643 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 CRB3Q9BUF7 120 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 ACAT2Q9BWD1 397 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 LHPPQ9H008 270 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 ZNF304Q9HCX3 659 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 STOX2Q9P2F5 926 aaPredicted RBP16.1■□□□□ 0.17
SMN2-216ENST00000638794 SOX13Q9UN79 622 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 SLC5A6Q9Y289 635 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 CACNA1DQ01668 2161 aa16.1■□□□□ 0.17
SMN2-216ENST00000638794 OR2A25A4D2G3 310 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 ESR1P03372 595 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 EIF2S1P05198 315 aaKnown RBP16.09■□□□□ 0.17
SMN2-216ENST00000638794 ATP5DP30049 168 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 KLC1Q07866 573 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 Q0VFX4 171 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 ELOAQ14241 798 aaKnown RBP16.09■□□□□ 0.17
SMN2-216ENST00000638794 RNF187Q5TA31 235 aaPredicted RBP16.09■□□□□ 0.17
SMN2-216ENST00000638794 PRSS58Q8IYP2 241 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 DNAJB14Q8TBM8 379 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 STT3BQ8TCJ2 826 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 C10orf90Q96M02 699 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 ZFYVE21Q9BQ24 234 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 DPH7Q9BTV6 452 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 LZTFL1Q9NQ48 299 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 AGPAT4Q9NRZ5 378 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 GALPQ9UBC7 116 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 CRYL1Q9Y2S2 319 aa16.09■□□□□ 0.17
SMN2-216ENST00000638794 DIDO1Q9BTC0 2240 aaKnown RBP16.09■□□□□ 0.17
SMN2-216ENST00000638794 ARHGEF33A8MVX0 844 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 GOLGA6L6A8MZA4 724 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 H3BMM5 538 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 CLDN1O95832 211 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 ZGLP1P0C6A0 271 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 ERVK-10P10266 1014 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 ERGP11308 486 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 CHRM3P20309 590 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 COL8A1P27658 744 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 CMPK1P30085 196 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 CARSP49589 748 aaKnown RBP16.08■□□□□ 0.16
SMN2-216ENST00000638794 TERF1P54274 439 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 ADARP55265 1226 aaKnown RBP16.08■□□□□ 0.16
SMN2-216ENST00000638794 CDK16Q00536 496 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 OCA2Q04671 838 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 MUM1Q2TAK8 710 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 KIAA0930Q6ICG6 404 aaPredicted RBP16.08■□□□□ 0.16
SMN2-216ENST00000638794 PRMT9Q6P2P2 845 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 FBXO42Q6P3S6 717 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 SUSD1Q6UWL2 747 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 MAMDC2Q7Z304 686 aaPredicted RBP16.08■□□□□ 0.16
SMN2-216ENST00000638794 ZGRF1Q86YA3 2104 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 OR9A1PQ8NGU1 263 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 MAIP1Q8WWC4 291 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 MIEF2Q96C03 454 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 THOC3Q96J01 351 aaKnown RBP16.08■□□□□ 0.16
SMN2-216ENST00000638794 VPS50Q96JG6 964 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 CNDP1Q96KN2 507 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 C5orf34Q96MH7 638 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 TCF12Q99081 682 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 SYNPO2LQ9H987 977 aa16.08■□□□□ 0.16
SMN2-216ENST00000638794 ZNF282Q9UDV7 671 aaPredicted RBP16.08■□□□□ 0.16
SMN2-216ENST00000638794 MYO9AB2RTY4 2548 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 H0YGG7 62 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 MYO1CO00159 1063 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 PFDN6O15212 129 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 AVILO75366 819 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 ACPPP15309 386 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 OGNP20774 298 aaKnown RBP16.07■□□□□ 0.16
SMN2-216ENST00000638794 FBLP22087 321 aaKnown RBP16.07■□□□□ 0.16
SMN2-216ENST00000638794 TSFMP43897 325 aaKnown RBP16.07■□□□□ 0.16
SMN2-216ENST00000638794 ARF3P61204 181 aaPredicted RBP16.07■□□□□ 0.16
SMN2-216ENST00000638794 ZNF169Q14929 603 aaPredicted RBP16.07■□□□□ 0.16
SMN2-216ENST00000638794 NAA25Q14CX7 972 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 TRIP13Q15645 432 aaPredicted RBP16.07■□□□□ 0.16
SMN2-216ENST00000638794 PRTGQ2VWP7 1150 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 ANKRD20A4Q4UJ75 823 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 VWA2Q5GFL6 755 aa16.07■□□□□ 0.16
SMN2-216ENST00000638794 CENPUQ71F23 418 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms