RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 HSH2DQ96JZ2 352 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 OR2AG1Q9H205 316 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 SPATA7Q9P0W8 599 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 APODP05090 189 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 CSKP41240 450 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 ZNF782Q6ZMW2 699 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-213ENST00000638680 PRR23BQ6ZRT6 265 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-213ENST00000638680 GALNT12Q8IXK2 581 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 SLC37A3Q8NCC5 494 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 KXD1Q9BQD3 176 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 NUP50Q9UKX7 468 aa18.05■□□□□ 0.48
SCARB2-213ENST00000638680 KANTRA0A1W2PQU2 76 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 PI15O43692 258 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TBX18O95935 607 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 RPS3AP61247 264 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 SLBPQ14493 270 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 NFKBIDQ8NI38 313 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 GPR151Q8TDV0 419 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 RNF38Q9H0F5 515 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 SLC32A1Q9H598 525 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 SMURF2Q9HAU4 748 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 PRPF38BQ5VTL8 546 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 SLC8B1Q6J4K2 584 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ZNF548Q8NEK5 533 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TMEM9Q9P0T7 183 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 GIMAP2Q9UG22 337 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 GPN3Q9UHW5 284 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 CMAHPQ9Y471 501 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 PCDHGB7Q9Y5F8 929 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ZSCAN5BA6NJL1 495 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 H1F0P07305 194 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 CHRM1P11229 460 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 VLDLRP98155 873 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 RPL6Q02878 288 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 PRAMEF17Q5VTA0 474 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TMEM236Q5W0B7 351 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 RIPOR3Q96MK2 946 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 GAL3ST4Q96RP7 486 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 SLC30A2Q9BRI3 323 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 THUMPD1Q9NXG2 353 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 J3KR12 359 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 AKAP8O43823 692 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 PIGRP01833 764 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 BCHEP06276 602 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 FPR1P21462 350 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 AHCYP23526 432 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 HCAR3P49019 387 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 SP3Q02447 781 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 LAPTM4AQ15012 233 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TIGD5Q53EQ6 642 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TREML1Q86YW5 311 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 CPA6Q8N4T0 437 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 C1orf52Q8N6N3 182 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 AQP11Q8NBQ7 271 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 RELTQ969Z4 430 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 CAMK1GQ96NX5 476 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 DPAGT1Q9H3H5 408 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 CHMP1AQ9HD42 196 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ZCCHC3Q9NUD5 404 aaKnown RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ISPDA4D126 451 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 B3GALT2O43825 422 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ENTPD6O75354 484 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 CD2P06729 351 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 FGF3P11487 239 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-213ENST00000638680 ADAM15Q13444 863 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TUBA3CQ13748 450 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 XKR4Q5GH76 650 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 UCK2Q9BZX2 261 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 TNFRSF10DQ9UBN6 386 aa18.04■□□□□ 0.48
SCARB2-213ENST00000638680 MYOCOSA0A1B0GUC4 107 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 AURKAO14965 403 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 CSN2P05814 226 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 SELPP16109 830 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 ZNF823P16415 610 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 ZNF182P17025 639 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-213ENST00000638680 LAG3P18627 525 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 MBOAT1Q6ZNC8 495 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 LRRC70Q7Z2Q7 622 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 P2RX2Q9UBL9 471 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 MGAT4AQ9UM21 535 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
SCARB2-213ENST00000638680 TFPTP0C1Z6 253 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 RPL17P18621 184 aaKnown RBP18.03■□□□□ 0.48
SCARB2-213ENST00000638680 PUM1Q14671 1186 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCARB2-213ENST00000638680 GFOD2Q3B7J2 385 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 FRG2Q64ET8 278 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 C1orf216Q8TAB5 229 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 FRMD6Q96NE9 622 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 FRG2BQ96QU4 278 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 TRMT61BQ9BVS5 477 aaKnown RBP18.03■□□□□ 0.48
SCARB2-213ENST00000638680 OSBPL2Q9H1P3 480 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 I3L521 148 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 MANBAO00462 879 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 PEPDP12955 493 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 ARL9Q6T311 187 aa18.03■□□□□ 0.48
SCARB2-213ENST00000638680 PRSS55Q6UWB4 352 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms