RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FAM167AQ96KS9 214 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 KCNS3Q9BQ31 491 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PELOQ9BRX2 385 aaKnown RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 MCOLN1Q9GZU1 580 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 TNKS2Q9H2K2 1166 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PIF1Q9H611 641 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 AASSQ9UDR5 926 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 STON1Q9Y6Q2 735 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PLA2G10O15496 165 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FGF18O76093 207 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FAM157BP0CG42 384 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FPR1P21462 350 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ICAM3P32942 547 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 MAP2K3P46734 347 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 SULT1E1P49888 294 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 KCNQ1P51787 676 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CLCNKAP51800 687 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FOXA1P55317 472 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 SOWAHAQ2M3V2 549 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 SOWAHCQ53LP3 525 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ZMAT1Q5H9K5 638 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 RETSATQ6NUM9 610 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 DPH6Q7L8W6 267 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 GALNT5Q7Z7M9 940 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 NLRP8Q86W28 1048 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 ATCAYQ86WG3 371 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PHC2Q8IXK0 858 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PGBD3Q8N328 593 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 STX19Q8N4C7 294 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 WDR48Q8TAF3 677 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 RHEBL1Q8TAI7 183 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 PROKR1Q8TCW9 393 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 BCL7CQ8WUZ0 217 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 NT5C3BQ969T7 300 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FAM162AQ96A26 154 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 SGTBQ96EQ0 304 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 MARVELD1Q9BSK0 173 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 FZD8Q9H461 694 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 RANBP3Q9H6Z4 567 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 POPDC3Q9HBV1 291 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 MED9Q9NWA0 146 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 RBFOX1Q9NWB1 397 aaKnown RBP11.7□□□□□ -0.54
CAPN3-221ENST00000638141 SPASTQ9UBP0 616 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CMAHPQ9Y471 501 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
CAPN3-221ENST00000638141 WDR90Q96KV7 1748 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 MROH6A6NGR9 719 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ACSL4O60488 711 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 TNFRSF21O75509 655 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 RGS20O76081 388 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 CXCL8P10145 99 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 PCSK2P16519 638 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 TPH1P17752 444 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 MAOBP27338 520 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 CASP2P42575 452 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 RORCP51449 518 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 LCP2Q13094 533 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ATP6AP1LQ52LC2 224 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 IGSF11Q5DX21 431 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 LCN1P1Q5VSP4 162 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 C1orf52Q8N6N3 182 aaKnown RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 HTATIP2Q9BUP3 242 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 BBS2Q9BXC9 721 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 GABARAPL3Q9BY60 117 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 MAGEB5Q9BZ81 275 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 CDT1Q9H211 546 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 HEBP1Q9NRV9 189 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 HACL1Q9UJ83 578 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 UTS2RQ9UKP6 389 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ING4Q9UNL4 249 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 HRH3Q9Y5N1 445 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 A0A096LPI6 279 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 S100A6P06703 90 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 LINC00032P0C843 101 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 SLC2A3P11169 496 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 TSPAN8P19075 237 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 C21orf33P30042 268 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 DNAJA1P31689 397 aaKnown RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 EVI2BP34910 448 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 SLC19A1P41440 591 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 GEMP55040 296 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 CREMQ03060 361 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 LARS2Q15031 903 aaKnown RBP11.69□□□□□ -0.54
CAPN3-221ENST00000638141 GPR158Q5T848 1215 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 HECTD2Q5U5R9 776 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 FAM160B1Q5W0V3 765 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 MZT2BQ6NZ67 158 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 OVCH2Q7RTZ1 564 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 FAM131BQ86XD5 332 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 GPR152Q8TDT2 470 aa11.69□□□□□ -0.54
CAPN3-221ENST00000638141 PYURFQ96I23 114 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms