RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 THEMIS2Q5TEJ8 643 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 VWA5B1Q5TIE3 1220 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 PRMT9Q6P2P2 845 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 SUSD1Q6UWL2 747 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 RNF44Q7L0R7 432 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 PALM2Q8IXS6 379 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 FBXO15Q8NCQ5 510 aaPredicted RBP18.14■□□□□ 0.49
CLN6-221ENST00000637494 COL26A1Q96A83 441 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 ZNF285Q96NJ3 590 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 GPR21Q99679 349 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 NUDT9Q9BW91 350 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 ZNF304Q9HCX3 659 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 ATP13A2Q9NQ11 1180 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 SLAMF7Q9NQ25 335 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 ENAMQ9NRM1 1142 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 TRMT6Q9UJA5 497 aaKnown RBP18.14■□□□□ 0.49
CLN6-221ENST00000637494 CDC23Q9UJX2 597 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 VPS4AQ9UN37 437 aa18.14■□□□□ 0.49
CLN6-221ENST00000637494 OR2A25A4D2G3 310 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 PRPF4O43172 522 aaKnown RBP eCLIP18.13■□□□□ 0.492e-7■■■■■ 31.7
CLN6-221ENST00000637494 HAUS5O94927 633 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 ONECUT2O95948 504 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 VARSP26640 1264 aaKnown RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 SKIV2L2P42285 1042 aaKnown RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 ABATP80404 500 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 OCA2Q04671 838 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 RAPSNQ13702 412 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 CRYMQ14894 314 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 NADK2Q4G0N4 442 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 SPANXN3Q5MJ09 141 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 IRAK1BP1Q5VVH5 260 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 FRMPD2BQ6IN97 320 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 SYDE1Q6ZW31 735 aaPredicted RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 UBE2R2Q712K3 238 aaPredicted RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 ADCK2Q7Z695 626 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 GALNT16Q8N428 558 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 ASB11Q8WXH4 323 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 TM9SF4Q92544 642 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 SLCO2A1Q92959 643 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 RERGQ96A58 199 aaPredicted RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 MIB2Q96AX9 1013 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 CABS1Q96KC9 395 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 SMAD5Q99717 465 aaKnown RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 EBNA1BP2Q99848 306 aaKnown RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 AARSD1Q9BTE6 412 aaKnown RBP18.13■□□□□ 0.49
CLN6-221ENST00000637494 SLC26A1Q9H2B4 701 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 ABCF3Q9NUQ8 709 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 TAC3Q9UHF0 121 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 PCYOX1Q9UHG3 505 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 CDC14AQ9UNH5 594 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 PLAAQ9Y263 795 aa18.13■□□□□ 0.49
CLN6-221ENST00000637494 PABPN1LA6NDY0 278 aaKnown RBP18.12■□□□□ 0.49
CLN6-221ENST00000637494 AGPSO00116 658 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 SMAPO00193 183 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 TXNDC9O14530 226 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 CNOT3O75175 753 aaKnown RBP18.12■□□□□ 0.49
CLN6-221ENST00000637494 SNRNP200O75643 2136 aaKnown RBP18.12■□□□□ 0.49
CLN6-221ENST00000637494 SLC16A8O95907 504 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 UMODP07911 640 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 MMP11P24347 488 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 OR1D4P47884 311 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 GNG11P61952 73 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 MPP1Q00013 466 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 PRDX1Q06830 199 aaKnown RBP18.12■□□□□ 0.49
CLN6-221ENST00000637494 NKG7Q16617 165 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 BBS9Q3SYG4 887 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 ICE2Q659A1 982 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 ZNF549Q6P9A3 640 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 PPP1R32Q7Z5V6 425 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 CPNE9Q8IYJ1 553 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 PDIK1LQ8N165 341 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 GIMAP7Q8NHV1 300 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 CPT1CQ8TCG5 803 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 CD200R1Q8TD46 325 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 MCOLN3Q8TDD5 553 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 CAPZA3Q96KX2 299 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 SLC30A3Q99726 388 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 PLCD4Q9BRC7 762 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 KCNF1Q9H3M0 494 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 PPANQ9NQ55 473 aaKnown RBP18.12■□□□□ 0.49
CLN6-221ENST00000637494 SEMA3GQ9NS98 782 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 SLC22A11Q9NSA0 550 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 TAS2R13Q9NYV9 303 aa18.12■□□□□ 0.49
CLN6-221ENST00000637494 LOC105369274A0A096LPK9 316 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 LOC102723532A0A0G2JNH3 316 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 GFYI3L273 518 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 F7P08709 466 aaPredicted RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 EZRP15311 586 aaKnown RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 PAFAH1B1P43034 410 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 CD97P48960 835 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 CARSP49589 748 aaKnown RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 EMP3P54852 163 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 DHX9Q08211 1270 aaKnown RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 AIMP2Q13155 320 aaKnown RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 MYBPC3Q14896 1274 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 RBBP7Q16576 425 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 JMJD6Q6NYC1 403 aaPredicted RBP18.11■□□□□ 0.49
CLN6-221ENST00000637494 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 KLHL7Q8IXQ5 586 aa18.11■□□□□ 0.49
CLN6-221ENST00000637494 OR4N4Q8N0Y3 316 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms