RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 TSPAN12O95859 305 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 ARSFP54793 590 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 TBPL1P62380 186 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 TAP2Q03519 686 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 PRDX1Q06830 199 aaKnown RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 DNASE1L3Q13609 305 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 ZNF460Q14592 562 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 UAP1Q16222 522 aaPredicted RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 TAF1BQ53T94 588 aaPredicted RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 PRAMEF13Q5VWM6 474 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 FCRL6Q6DN72 434 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 CAPN13Q6MZZ7 669 aaPredicted RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 AGTRAPQ6RW13 159 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 RAPH1Q70E73 1250 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 ADAMTSL2Q86TH1 951 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 MCATQ8IVS2 390 aaKnown RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 ZNF655Q8N720 491 aaPredicted RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 CT55Q8WUE5 264 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 ANKRD7Q92527 254 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 GPR22Q99680 433 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 EGFL8Q99944 293 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 ZFYVE21Q9BQ24 234 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 CTNNAL1Q9UBT7 734 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 SNX7Q9UNH6 387 aa16.35■□□□□ 0.21
LIN28B-202ENST00000635857 MTO1Q9Y2Z2 717 aaKnown RBP16.35■□□□□ 0.21
LIN28B-202ENST00000635857 PTPRQQ9UMZ3 2332 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 LAMA5O15230 3695 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 ERVH48-1M5A8F1 160 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 SRPX2O60687 465 aaPredicted RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 RHOXF2BP0C7M4 288 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 HRH2P25021 359 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 GPS2Q13227 327 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 GRM7Q14831 915 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 TAOK1Q7L7X3 1001 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 RELL1Q8IUW5 271 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 DSELQ8IZU8 1212 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 PROKR1Q8TCW9 393 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 RERGQ96A58 199 aaPredicted RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 MRRFQ96E11 262 aaKnown RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 CATSPER2Q96P56 530 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 RHOXF2Q9BQY4 288 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 GPR87Q9BY21 358 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 FAM117AQ9C073 453 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 SPRTNQ9H040 489 aaPredicted RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 ATG10Q9H0Y0 220 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 CDC42EP4Q9H3Q1 356 aaKnown RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 NDOR1Q9UHB4 597 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 GPN3Q9UHW5 284 aaPredicted RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 NOVA2Q9UNW9 492 aaKnown RBP16.34■□□□□ 0.21
LIN28B-202ENST00000635857 KLK4Q9Y5K2 254 aa16.34■□□□□ 0.21
LIN28B-202ENST00000635857 A0A0J9YVX5 310 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 NPEPPSL1A6NEC2 478 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 ACSL3O95573 720 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 GUCA1CO95843 209 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 ITGB2P05107 769 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 ANXA5P08758 320 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PRKAR1AP10644 381 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 EZRP15311 586 aaKnown RBP16.33■□□□□ 0.2
LIN28B-202ENST00000635857 GRK3P35626 688 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 GABRA4P48169 554 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PGGT1BP53609 377 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 VSX2P58304 361 aaPredicted RBP16.33■□□□□ 0.2
LIN28B-202ENST00000635857 RAB10P61026 200 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 NAE1Q13564 534 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PHKG1Q16816 387 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PRAMEF17Q5VTA0 474 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 YOD1Q5VVQ6 348 aaPredicted RBP16.33■□□□□ 0.2
LIN28B-202ENST00000635857 RHBDD2Q6NTF9 364 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 C16orf46Q6P387 395 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 FAM199XQ6PEV8 388 aaPredicted RBP16.33■□□□□ 0.2
LIN28B-202ENST00000635857 MBOAT1Q6ZNC8 495 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 C17orf64Q86WR6 236 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 SPNS2Q8IVW8 549 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 CEP97Q8IW35 865 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PLCD4Q9BRC7 762 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 HAUS8Q9BT25 410 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 MCMBPQ9BTE3 642 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 CAB39LQ9H9S4 337 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 SLC6A20Q9NP91 592 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PCMTD2Q9NV79 361 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 IL17BQ9UHF5 180 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 PADI2Q9Y2J8 665 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 ZFHX4Q86UP3 3567 aa16.33■□□□□ 0.2
LIN28B-202ENST00000635857 OR2A25A4D2G3 310 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 PHGDHO43175 533 aaKnown RBP16.32■□□□□ 0.2
LIN28B-202ENST00000635857 S100BP04271 92 aaPredicted RBP16.32■□□□□ 0.2
LIN28B-202ENST00000635857 EIF2S1P05198 315 aaKnown RBP16.32■□□□□ 0.2
LIN28B-202ENST00000635857 CD63P08962 238 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 PIM1P11309 404 aaPredicted RBP16.32■□□□□ 0.2
LIN28B-202ENST00000635857 ALAS2P22557 587 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 RORAP35398 523 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 ATP6V0D1P61421 351 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 CDC20Q12834 499 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 EFTUD2Q15029 972 aaKnown RBP eCLIP16.32■□□□□ 0.2
LIN28B-202ENST00000635857 FAM214AQ32MH5 1076 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 PTCHD3Q3KNS1 767 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
LIN28B-202ENST00000635857 TBC1D1Q86TI0 1168 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms