RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 DCAF10Q5QP82 559 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 WASHC2DQ5SRD0 308 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 SUSD1Q6UWL2 747 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 OVCH1Q7RTY7 1134 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 KCNMB4Q86W47 210 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 ASB11Q8WXH4 323 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 FER1L6-AS2Q96M78 137 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 SPSB2Q99619 263 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 GPR21Q99679 349 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 ZFYVE21Q9BQ24 234 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 AARSD1Q9BTE6 412 aaKnown RBP13.09□□□□□ -0.31
TREX1-206ENST00000629913 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 SLC26A1Q9H2B4 701 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 WDR54Q9H977 334 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 IARS2Q9NSE4 1012 aaKnown RBP13.09□□□□□ -0.31
TREX1-206ENST00000629913 P4HTMQ9NXG6 502 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 GPR83Q9NYM4 423 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 ANKMY1Q9P2S6 941 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 G3BP2Q9UN86 482 aaKnown RBP13.09□□□□□ -0.31
TREX1-206ENST00000629913 PLAAQ9Y263 795 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 HECTD1Q9ULT8 2610 aa13.09□□□□□ -0.31
TREX1-206ENST00000629913 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 HYKKA2RU49 373 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 A6NL46 340 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 ZNF839A8K0R7 811 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 GFYI3L273 518 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 EIF3FO00303 357 aaPredicted RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 PEX12O00623 359 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 BANF1O75531 89 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 SORBS2O94875 1100 aaKnown RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 TTC4O95801 387 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 IGHEP01854 428 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 PIM1P11309 404 aaPredicted RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 CD97P48960 835 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 NKG7Q16617 165 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 FAM214AQ32MH5 1076 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 ZNF425Q6IV72 752 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 FBXO42Q6P3S6 717 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 CYHR1Q6ZMK1 362 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 PIWIL4Q7Z3Z4 852 aaKnown RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 PCGF5Q86SE9 256 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 PAQR7Q86WK9 346 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 HPS6Q86YV9 775 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 CNTN4Q8IWV2 1026 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 CPNE9Q8IYJ1 553 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 DTWD1Q8N5C7 304 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 METTL27Q8N6F8 245 aaPredicted RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 C2CD4AQ8NCU7 369 aaPredicted RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 ZNF480Q8WV37 535 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 EBNA1BP2Q99848 306 aaKnown RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 PLCD4Q9BRC7 762 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 MRPS30Q9NP92 439 aaKnown RBP13.08□□□□□ -0.32
TREX1-206ENST00000629913 CTSFQ9UBX1 484 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
TREX1-206ENST00000629913 PCM1Q15154 2024 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 E7ENX8 843 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 DPM1O60762 260 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 VPS26AO75436 327 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 CCNDBP1O95273 360 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 ERVK-10P10266 1014 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 MMP11P24347 488 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 OR1D4P47884 311 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 TIAL1Q01085 375 aaKnown RBP eCLIP13.07□□□□□ -0.32
TREX1-206ENST00000629913 TAP2Q03519 686 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 PRDX1Q06830 199 aaKnown RBP13.07□□□□□ -0.32
TREX1-206ENST00000629913 RAPSNQ13702 412 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 PRTGQ2VWP7 1150 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 SPANXN3Q5MJ09 141 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 ICE2Q659A1 982 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 CREG2Q8IUH2 290 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 IGDCC3Q8IVU1 814 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
TREX1-206ENST00000629913 CLEC1AQ8NC01 280 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 PPFIBP2Q8ND30 876 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 PDLIM2Q96JY6 352 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 CAPZA3Q96KX2 299 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 C10orf90Q96M02 699 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 NDNQ99608 321 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 SYNPO2LQ9H987 977 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 PLAC1Q9HBJ0 212 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 ZC3H7BQ9UGR2 993 aaKnown RBP13.07□□□□□ -0.32
TREX1-206ENST00000629913 NXT1Q9UKK6 140 aaKnown RBP13.07□□□□□ -0.32
TREX1-206ENST00000629913 PTPN13Q12923 2485 aa13.07□□□□□ -0.32
TREX1-206ENST00000629913 CCDC88CQ9P219 2028 aa13.06□□□□□ -0.32
TREX1-206ENST00000629913 LRRK2Q5S007 2527 aa13.06□□□□□ -0.32
TREX1-206ENST00000629913 VSTM2BA6NLU5 285 aa13.06□□□□□ -0.32
TREX1-206ENST00000629913 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
TREX1-206ENST00000629913 H0YGG7 62 aa13.06□□□□□ -0.32
TREX1-206ENST00000629913 AGPSO00116 658 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms