RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-219	ENST00000629151	SEC16B	Q96JE7	1060 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	CNDP1	Q96KN2	507 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	TGM7	Q96PF1	710 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	ZNF768	Q9H5H4	540 aa	Known RBP	11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	SYNDIG1	Q9H7V2	258 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	SPHK1	Q9NYA1	384 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	SLC17A7	Q9P2U7	560 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	CIDEB	Q9UHD4	219 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	TAC3	Q9UHF0	121 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	CLCA2	Q9UQC9	943 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	SLC22A14	Q9Y267	594 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	CABIN1	Q9Y6J0	2220 aa		11.13	□□□□□ -0.63
PTPN7-219	ENST00000629151	EP300	Q09472	2414 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	IGHV5-10-1	A0A0J9YXX1	117 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SPAAR	A0A1B0GVQ0	90 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	GIPC1	O14908	333 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	RASSF9	O75901	435 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	MT-CO3	P00414	261 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	BPGM	P07738	259 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	MSL3P1	P0C860	447 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	DHRS4L1	P0CG22	281 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	THRA	P10827	490 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	GRK2	P25098	689 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	GSTM2	P28161	218 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	EEF1D	P29692	281 aa	Known RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	CSTF2	P33240	577 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	CASP2	P42575	452 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SERPINB4	P48594	390 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	CCR8	P51685	355 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	PPP2R2A	P63151	447 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	HSD11B2	P80365	405 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	INSM1	Q01101	510 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	CFHR1	Q03591	330 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	GALNT1	Q10472	559 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	LAPTM5	Q13571	262 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	TBCC	Q15814	346 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	TTMP	Q5BVD1	217 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	PAGE2B	Q5JRK9	111 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	ZNF678	Q5SXM1	525 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	C10orf62	Q5T681	223 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SLCO6A1	Q86UG4	719 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	NUDCD3	Q8IVD9	361 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SLITRK4	Q8IW52	837 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	CHCHD4	Q8N4Q1	142 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SNX31	Q8N9S9	440 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	PPFIBP2	Q8ND30	876 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	AGBL5	Q8NDL9	886 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	FLVCR1-AS1	Q8TAF5	88 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	RAB3IL1	Q8TBN0	382 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SLC5A11	Q8WWX8	675 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	UBE2E3	Q969T4	207 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	PYCR2	Q96C36	320 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	CMKLR1	Q99788	373 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	SELENOS	Q9BQE4	189 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	NUDT22	Q9BRQ3	303 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	TMEM79	Q9BSE2	394 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	EFCAB11	Q9BUY7	163 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	PELI2	Q9HAT8	420 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	PDE7B	Q9NP56	450 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	RALGAPA1	Q6GYQ0	2036 aa		11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-219	ENST00000629151	TMEM131	Q92545	1883 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	E2F3	O00716	465 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	SRPX2	O60687	465 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	SUPT7L	O94864	414 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	OTC	P00480	354 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	RPS17	P08708	135 aa	Known RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	C1GALT1C1L	P0DN25	315 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	NEFH	P12036	1026 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	HOXB3	P14651	431 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	JUP	P14923	745 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	NELFE	P18615	380 aa	Known RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	PEBP1	P30086	187 aa	Known RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	HPD	P32754	393 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	CSF2RB	P32927	897 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	HNF4A	P41235	474 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	GRIA3	P42263	894 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	GDF5	P43026	501 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	NAGLU	P54802	743 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	PKNOX1	P55347	436 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	IRF8	Q02556	426 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	ACY1	Q03154	408 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	GTF2H2	Q13888	395 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	PCLAF	Q15004	111 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	ISX	Q2M1V0	245 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	CCDC157	Q569K6	752 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	PHF19	Q5T6S3	580 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	LIPJ	Q5W064	366 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	HIST2H2AA3	Q6FI13	130 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	GTF2H2C	Q6P1K8	395 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	FIGLA	Q6QHK4	219 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	NXPE4	Q6UWF7	544 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	DHRS13	Q6UX07	377 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	FAM92B	Q6ZTR7	304 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	TAX1BP1	Q86VP1	789 aa		11.11	□□□□□ -0.63
PTPN7-219	ENST00000629151	C10orf107	Q8IVU9	208 aa		11.11	□□□□□ -0.63

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