RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PACSIN3Q9UKS6 424 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PPIL1Q9Y3C6 166 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 ACOT8O14734 319 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PAPLNO95428 1278 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 SP9P0CG40 484 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 IMPDH1P20839 514 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PDHA2P29803 388 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 TRIP10Q15642 601 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 MFSD4BQ5TF39 518 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 C8orf82Q6P1X6 216 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM154Q6P9G4 183 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 MIER2Q8N344 545 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 IL17FQ96PD4 163 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 COPS7BQ9H9Q2 264 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 FSCN3Q9NQT6 498 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 HRASLS2Q9NWW9 162 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 NDUFAF1Q9Y375 327 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 ANKDD1BA6NHY2 528 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 GSTA4O15217 222 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 CBSLP0DN79 551 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 PEX2P28328 305 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 CCR7P32248 378 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 CBSP35520 551 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 SUSD1Q6UWL2 747 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 SDCCAG3Q96C92 435 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 SPDL1Q96EA4 605 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 MARK4Q96L34 752 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 MEAF6Q9HAF1 191 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 EIF3LQ9Y262 564 aaKnown RBP12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 MED16Q9Y2X0 877 aa12.08□□□□□ -0.47
SYNGAP1-207ENST00000628646 GPR89AB7ZAQ6 455 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 SNRPB2P08579 225 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 GPR89BP0CG08 455 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 FOXM1Q08050 763 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 ENPP2Q13822 863 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 GSTA3Q16772 222 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 OGFRL1Q5TC84 451 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 ISCA2Q86U28 154 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 APLFQ8IW19 511 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 ST13P4Q8IZP2 240 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 VPS35Q96QK1 796 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 DNAJC11Q9NVH1 559 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 KRT6AP02538 564 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 KRT6BP04259 564 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 KRT6CP48668 564 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 PRLHRP49683 370 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 SEPHS1P49903 392 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 KIAA1024LP59773 190 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 ALG11Q2TAA5 492 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 PAGE2BQ5JRK9 111 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 SAMD4BQ5PRF9 694 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR2I1PQ8NGU4 316 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 CDRT15Q96T59 188 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 TRNAU1APQ9NX07 287 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 ANKRD12Q6UB98 2062 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 KLHL33A6NCF5 533 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 MRASO14807 208 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 INHBCP55103 352 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 CYP4F2P78329 520 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 GALNT1Q10472 559 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 MED21Q13503 144 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 WDR5BQ86VZ2 330 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 LILRA3Q8N6C8 439 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 TP53I13Q8NBR0 393 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR2L2Q8NH16 312 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 PTERQ96BW5 349 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 RCN3Q96D15 328 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 NR1H4Q96RI1 486 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 ELF4Q99607 663 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 WDR41Q9HAD4 459 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 PCDHGA2Q9Y5H1 932 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 SNX11Q9Y5W9 270 aa12.08□□□□□ -0.48
SYNGAP1-207ENST00000628646 KIF1CO43896 1103 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 PSMA3P25788 255 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 CMPK1P30085 196 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TPD52P55327 224 aaPredicted RBP12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TYSND1Q2T9J0 566 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TMEM259Q4ZIN3 620 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 LILRA2Q8N149 483 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 CDYL2Q8N8U2 506 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 CCL4L1Q8NHW4 92 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 IL21RQ9HBE5 538 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 NUDT4Q9NZJ9 180 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 PATE3B3GLJ2 98 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 STX16-NPEPL1H3BU86 382 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 FBP2O00757 339 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 HRO43593 1189 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 HSPA13P48723 471 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 AQP4P55087 323 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 FGL2Q14314 439 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 SZRD1Q7Z422 152 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 GPR135Q8IZ08 494 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 KRT78Q8N1N4 520 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR5AR1Q8NGP9 310 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 RERGQ96A58 199 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms