RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SLC30A4O14863 429 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PRICKLE3O43900 615 aaPredicted RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 RASSF9O75901 435 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SUPT7LO94864 414 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CCNDBP1O95273 360 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CPNE6O95741 557 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 RPS17P08708 135 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 DHRS4L1P0CG22 281 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 NEFHP12036 1026 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CHN1P15882 459 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 EPB42P16452 691 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 IMPDH1P20839 514 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 MPSTP25325 297 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PRDX3P30048 256 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 NAGLUP54802 743 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 DNAJB13P59910 316 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 YBX1P67809 324 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CFHR1Q03591 330 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ASPHQ12797 758 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CDC16Q13042 620 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 GTF2H2Q13888 395 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SPIDRQ14159 915 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PCBP2Q15366 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SF1Q15637 639 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PDK4Q16654 411 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SLC5A12Q1EHB4 618 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 UNC50Q53HI1 259 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CFAP157Q5JU67 520 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SNAP47Q5SQN1 464 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ICE2Q659A1 982 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 GTF2H2CQ6P1K8 395 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 WDR74Q6RFH5 385 aaPredicted RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SPESP1Q6UW49 350 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 LCTLQ6UWM7 567 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 RPS27LQ71UM5 84 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 GOLGA7Q7Z5G4 137 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 GLRX5Q86SX6 157 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 TRIM73Q86UV7 250 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ALYREFQ86V81 257 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 C17orf64Q86WR6 236 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PLXDC1Q8IUK5 500 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 NUDCD3Q8IVD9 361 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 FAM20CQ8IXL6 584 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 KLHDC8AQ8IYD2 350 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 TEX9Q8N6V9 391 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 CCNYL1Q8N7R7 359 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PPP1R14CQ8TAE6 165 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 FLVCR1-AS1Q8TAF5 88 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PPP4R1Q8TF05 950 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ZNF483Q8TF39 744 aaPredicted RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 DYDC1Q8WWB3 177 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 L3HYPDHQ96EM0 354 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 MOCOSQ96EN8 888 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ZDHHC12Q96GR4 267 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 NSUN5Q96P11 429 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 OR4K3Q96R72 315 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 HAUS8Q9BT25 410 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PITPNM3Q9BZ71 974 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PCBD2Q9H0N5 130 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 MRPS30Q9NP92 439 aaKnown RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SEMA4BQ9NPR2 832 aaPredicted RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 TMEM9Q9P0T7 183 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 PCTPQ9UKL6 214 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 POMT2Q9UKY4 750 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 SH2B3Q9UQQ2 575 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 DYRK1BQ9Y463 629 aa8.21□□□□□ -1.1
SGMS1-211ENST00000626236 EP300Q09472 2414 aaPredicted RBP8.21□□□□□ -1.1
SGMS1-211ENST00000626236 ASXL3Q9C0F0 2248 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 A0A0J9YY10 115 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 E7EQ34 232 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 TM4SF5O14894 197 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 GIPC1O14908 333 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CLGNO14967 610 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 BIRC5O15392 142 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 KIF1CO43896 1103 aaKnown RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 TRIM13O60858 407 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 FGF3P11487 239 aaPredicted RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CDH1P12830 882 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 NPPBP16860 134 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 TSPAN8P19075 237 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 GNAZP19086 355 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CSRP1P21291 193 aaKnown RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 BGNP21810 368 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CDH3P22223 829 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CMPK1P30085 196 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 ARL1P40616 181 aaPredicted RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 GCGRP47871 477 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 LSSP48449 732 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 PIK3CGP48736 1102 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 NOVA1P51513 510 aaKnown RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CDH13P55290 713 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 ABATP80404 500 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 SIM1P81133 766 aaPredicted RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 PRDX1Q06830 199 aaKnown RBP8.2□□□□□ -1.1
SGMS1-211ENST00000626236 ILKQ13418 452 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 CHI3L2Q15782 390 aa8.2□□□□□ -1.1
SGMS1-211ENST00000626236 RBBP7Q16576 425 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms