RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 HRH2P25021 359 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 MCM3P25205 808 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 PSMB5P28074 263 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 EMP3P54852 163 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 IL2P60568 153 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 TAP2Q03519 686 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 CKAP4Q07065 602 aaKnown RBP21.43■■□□□ 1.02
SF1-220ENST00000626028 FASTKQ14296 549 aaKnown RBP21.43■■□□□ 1.02
SF1-220ENST00000626028 PTCHD3Q3KNS1 767 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 HP1BP3Q5SSJ5 553 aaPredicted RBP21.43■■□□□ 1.02
SF1-220ENST00000626028 ATP1A1-AS1Q5TC04 95 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 DUPD1Q68J44 220 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 LCN10Q6JVE6 187 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 TRMT10BQ6PF06 316 aaKnown RBP21.43■■□□□ 1.02
SF1-220ENST00000626028 CYS1Q717R9 158 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 RNF44Q7L0R7 432 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 MYO1HQ8N1T3 1032 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 FBXO36Q8NEA4 188 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 ADAMTS17Q8TE56 1095 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 EEF1AKMT1Q8WVE0 214 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 CCDC138Q96M89 665 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 PCBD2Q9H0N5 130 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 PARVBQ9HBI1 364 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 MRPS30Q9NP92 439 aaKnown RBP21.43■■□□□ 1.02
SF1-220ENST00000626028 KLHL20Q9Y2M5 609 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 VWA7Q9Y334 891 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 BSNQ9UPA5 3926 aa21.43■■□□□ 1.02
SF1-220ENST00000626028 A0A1B0GX78 115 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 RAD51CO43502 376 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 CTSVO60911 334 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 F7P08709 466 aaPredicted RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 CCND1P24385 295 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 CDKN2DP55273 166 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 PDAP1Q13442 181 aaKnown RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 NKAIN1Q4KMZ8 207 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 ICE2Q659A1 982 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 PAQR3Q6TCH7 311 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 PIWIL4Q7Z3Z4 852 aaKnown RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 C17orf53Q8N3J3 647 aaPredicted RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 C9orf43Q8TAL5 461 aaPredicted RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 PYROXD1Q8WU10 500 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 ANKRD7Q92527 254 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 FKBP10Q96AY3 582 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 NACC2Q96BF6 587 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 PDLIM5Q96HC4 596 aaKnown RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 RUFY1Q96T51 708 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 ZFYVE21Q9BQ24 234 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 DPH7Q9BTV6 452 aa21.42■■□□□ 1.02
SF1-220ENST00000626028 GPN3Q9UHW5 284 aaPredicted RBP21.42■■□□□ 1.02
SF1-220ENST00000626028 KRT87PA6NCN2 255 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 MKRN2OSH3BPM6 223 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 DSCR3O14972 297 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 RFPL1O75677 317 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 ALBP02768 609 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 TUBB4AP04350 444 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 GSTA2P09210 222 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 EZRP15311 586 aaKnown RBP21.41■■□□□ 1.02
SF1-220ENST00000626028 FDXRP22570 491 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 RPS18P62269 152 aaKnown RBP21.41■■□□□ 1.02
SF1-220ENST00000626028 RBM20Q5T481 1227 aaKnown RBP21.41■■□□□ 1.02
SF1-220ENST00000626028 HECTD2Q5U5R9 776 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 ANKMY2Q8IV38 441 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 ZBED8Q8IZ13 594 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 TTC29Q8NA56 475 aaPredicted RBP21.41■■□□□ 1.02
SF1-220ENST00000626028 PLCD4Q9BRC7 762 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 IFT80Q9P2H3 777 aaPredicted RBP21.41■■□□□ 1.02
SF1-220ENST00000626028 NDOR1Q9UHB4 597 aa21.41■■□□□ 1.02
SF1-220ENST00000626028 KLF7O75840 302 aaPredicted RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 SYF2O95926 243 aaKnown RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 IMPA1P29218 277 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 AP1S2P56377 157 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 C2orf54Q08AI8 447 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 NFATC3Q12968 1075 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 IL10RAQ13651 578 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 SSPNQ14714 243 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 FASTKD3Q14CZ7 662 aaKnown RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 ZNF425Q6IV72 752 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 SUSD1Q6UWL2 747 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 ZC3HC1Q86WB0 502 aaKnown RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 RAB43Q86YS6 212 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 LRRC56Q8IYG6 542 aaPredicted RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 TRIM54Q9BYV2 358 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 WDR54Q9H977 334 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 SLC6A20Q9NP91 592 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 CUTCQ9NTM9 273 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 GRHL1Q9NZI5 618 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 DHCR7Q9UBM7 475 aaKnown RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 TAC3Q9UHF0 121 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 CDC23Q9UJX2 597 aa21.4■■□□□ 1.02
SF1-220ENST00000626028 HEMK1Q9Y5R4 338 aaPredicted RBP21.4■■□□□ 1.02
SF1-220ENST00000626028 TXNDC9O14530 226 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 TSPAN12O95859 305 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 IGHEP01854 428 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 CTSBP07858 339 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 ENO2P09104 434 aaPredicted RBP21.39■■□□□ 1.01
SF1-220ENST00000626028 HIST1H2AGP0C0S8 130 aaPredicted RBP21.39■■□□□ 1.01
SF1-220ENST00000626028 HIST1H2ADP20671 130 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 TCTN3Q6NUS6 607 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 MRPL14Q6P1L8 145 aaKnown RBP21.39■■□□□ 1.01
SF1-220ENST00000626028 MED25Q71SY5 747 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms