RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 EBPLQ9BY08 206 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 TP63Q9H3D4 680 aaPredicted RBP11.53□□□□□ -0.56
ATRX-214ENST00000624166 TMEM248Q9NWD8 314 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 FZD4Q9ULV1 537 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 CMAHPQ9Y471 501 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PCDHA9Q9Y5H5 950 aa11.53□□□□□ -0.56
ATRX-214ENST00000624166 PAPPAQ13219 1627 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 ITGB4P16144 1822 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 KDELR2P33947 212 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 PNLIPRP1P54315 467 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 BEX3Q00994 111 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 TIGD5Q53EQ6 642 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 BHLHB9Q6PI77 547 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 GALNT7Q86SF2 657 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 PTRH1Q86Y79 214 aaKnown RBP11.52□□□□□ -0.56
ATRX-214ENST00000624166 FRS2Q8WU20 508 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 ASZ1Q8WWH4 475 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 C1orf74Q96LT6 269 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 MND1Q9BWT6 205 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 MIR1-1HGQ9H1L0 117 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 TREX1Q9NSU2 369 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 COMMD3Q9UBI1 195 aa11.52□□□□□ -0.56
ATRX-214ENST00000624166 SHMT2P34897 504 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 VMACQ2NL98 169 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 DESI1Q6ICB0 168 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 FBXL22Q6P050 247 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 DNAJB7Q7Z6W7 309 aaPredicted RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 ELMOD2Q8IZ81 293 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 GPC2Q8N158 579 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 LILRB4Q8NHJ6 448 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 GEMIN6Q8WXD5 167 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 PTERQ96BW5 349 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 SLA2Q9H6Q3 261 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 C11orf16Q9NQ32 467 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 PCTPQ9UKL6 214 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 PRAMEF33A0A0G2JMD5 474 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 A0A1B0GTW7 788 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 UBE2QL1A1L167 161 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ADM5C9JUS6 153 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 TREHO43280 583 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 PRAMEF10O60809 474 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 BEST1O76090 585 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 CPNE6O95741 557 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 AKR1A1P14550 325 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 NR4A2P43354 598 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 MAPK9P45984 424 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ARSDP51689 593 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 AP1S1P61966 158 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ADARB1P78563 741 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 AGAP6Q5VW22 663 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 TRMT11Q7Z4G4 463 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 CIR1Q86X95 450 aaPredicted RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 SETD6Q8TBK2 473 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 FUBP3Q96I24 572 aaKnown RBP eCLIP11.52□□□□□ -0.57
ATRX-214ENST00000624166 AGAP4Q96P64 663 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 TRPS1Q9UHF7 1281 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 HSPB11Q9Y547 144 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ARHGEF33A8MVX0 844 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 SEMA3DO95025 777 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 IFNA7P01567 189 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 PRKCGP05129 697 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ITGAMP11215 1152 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 CXCR2P25025 360 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 HTR1BP28222 390 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 SLC6A4P31645 630 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 NSG1P42857 185 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 MAPK12P53778 367 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 ABATP80404 500 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ZNF789Q5FWF6 425 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 ZNF691Q5VV52 312 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 DUS1LQ6P1R4 473 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 LRRC70Q7Z2Q7 622 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 C11orf24Q96F05 449 aaPredicted RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 VMP1Q96GC9 406 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 NSUN3Q9H649 340 aaKnown RBP11.52□□□□□ -0.57
ATRX-214ENST00000624166 TPT1P8Q9HAU6 139 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 SMURF1Q9HCE7 757 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 SEMA3GQ9NS98 782 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 C14orf119Q9NWQ9 140 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 MAP10Q9P2G4 905 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 SEC14L3Q9UDX4 400 aa11.52□□□□□ -0.57
ATRX-214ENST00000624166 A0A1B0GVM2 712 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 TTC24A2A3L6 582 aaPredicted RBP11.51□□□□□ -0.57
ATRX-214ENST00000624166 TLR4O00206 839 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 CCNYL3P0C7X3 344 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 RPS3AP61247 264 aaKnown RBP11.51□□□□□ -0.57
ATRX-214ENST00000624166 GPR33Q49SQ1 333 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 ELMSAN1Q6PJG2 1045 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 SNX20Q7Z614 316 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 CMTM7Q96FZ5 175 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 MGLLQ99685 303 aa11.51□□□□□ -0.57
ATRX-214ENST00000624166 POLR2J3Q9H1A7 115 aaKnown RBP11.51□□□□□ -0.57
ATRX-214ENST00000624166 KCNN2Q9H2S1 579 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms