RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 LRFN5Q96NI6 719 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 FMO2Q99518 471 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 RBBP8Q99708 897 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 SELENOSQ9BQE4 189 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 ARHGAP9Q9BRR9 750 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 NDC1Q9BTX1 674 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 CAB39LQ9H9S4 337 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 CCDC177Q9NQR7 707 aaPredicted RBP13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 ARL15Q9NXU5 204 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 STOX2Q9P2F5 926 aaPredicted RBP13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 SRPK3Q9UPE1 567 aa13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 MTO1Q9Y2Z2 717 aaKnown RBP13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 MRPS18BQ9Y676 258 aaKnown RBP13.42□□□□□ -0.26
PCDHGC3-208ENST00000622836 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 ERVH48-1M5A8F1 160 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 NKX2-8O15522 239 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 GUCA1CO95843 209 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 TSPAN12O95859 305 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 F8A1P23610 371 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 SPRP35270 261 aaPredicted RBP13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 TBPL1P62380 186 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 ABATP80404 500 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 COL9A2Q14055 689 aaPredicted RBP13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 SLMAPQ14BN4 828 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 PHKG1Q16816 387 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 PTCHD3Q3KNS1 767 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 TCTE1Q5JU00 501 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 GRTP1Q5TC63 336 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 C1orf189Q5VU69 101 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 AGTRAPQ6RW13 159 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 FRA10AC1Q70Z53 315 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 TTC29Q8NA56 475 aaPredicted RBP13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 MRRFQ96E11 262 aaKnown RBP13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 ATG10Q9H0Y0 220 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 CHST8Q9H2A9 424 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 AKIRIN1Q9H9L7 192 aaPredicted RBP13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 POPDC3Q9HBV1 291 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 SLC6A20Q9NP91 592 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 NDOR1Q9UHB4 597 aa13.41□□□□□ -0.26
PCDHGC3-208ENST00000622836 IGSF10Q6WRI0 2623 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 NPEPPSL1A6NEC2 478 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 C9J4A7 227 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 CTSVO60911 334 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 CTSBP07858 339 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 RHOXF2BP0C7M4 288 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 STMN1P16949 149 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ALAS2P22557 587 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 AP1S2P56377 157 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 VSX2P58304 361 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 YBX1P67809 324 aaKnown RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 PRDX1Q06830 199 aaKnown RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 CDC20Q12834 499 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 NAB1Q13506 487 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 NAE1Q13564 534 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ERV3-1Q14264 604 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 EFTUD2Q15029 972 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 UAP1Q16222 522 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 TMEM207Q6UWW9 146 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 RAPH1Q70E73 1250 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 CEP97Q8IW35 865 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ATL1Q8WXF7 558 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 PDLIM5Q96HC4 596 aaKnown RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 GPR22Q99680 433 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 EGFL8Q99944 293 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ZFYVE21Q9BQ24 234 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 DPH2Q9BQC3 489 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 RHOXF2Q9BQY4 288 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 PLCD4Q9BRC7 762 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 GPR87Q9BY21 358 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ACTL8Q9H568 366 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 STARD5Q9NSY2 213 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ANKMY1Q9P2S6 941 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 DHCR7Q9UBM7 475 aaKnown RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 CTNNAL1Q9UBT7 734 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 GPN3Q9UHW5 284 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 SNX7Q9UNH6 387 aa13.4□□□□□ -0.26
PCDHGC3-208ENST00000622836 ANKRD12Q6UB98 2062 aa13.4□□□□□ -0.27
PCDHGC3-208ENST00000622836 PCM1Q15154 2024 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 CDC14CA4D256 554 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 PHGDHO43175 533 aaKnown RBP13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 NRP2O60462 931 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 SRPX2O60687 465 aaPredicted RBP13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 CREG1O75629 220 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 FAM155BO75949 473 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 ACSL3O95573 720 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 ITGB2P05107 769 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 CCND1P24385 295 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 PTPN4P29074 926 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 RORAP35398 523 aa13.39□□□□□ -0.27
PCDHGC3-208ENST00000622836 ARSFP54793 590 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms