RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MT-CO3P00414 261 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 RPLP0P05388 317 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 CHN1P15882 459 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 NPPBP16860 134 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 NAA20P61599 178 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 TSTA3Q13630 321 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 NKAIN2Q5VXU1 208 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 NUDCD3Q8IVD9 361 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 SREK1Q8WXA9 508 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 OR2A14Q96R47 310 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 PAIP2Q9BPZ3 127 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 HAUS8Q9BT25 410 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 LRRN3Q9H3W5 708 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 DNAJC11Q9NVH1 559 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 TAC3Q9UHF0 121 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 PCTPQ9UKL6 214 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 POMT2Q9UKY4 750 aa19.13■□□□□ 0.65
PDLIM2-221ENST00000622702 A0A1W2PQM1 296 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 GSAPA4D1B5 854 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 ISM1B1AKI9 464 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 UGT2B7P16662 529 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 PIK3CGP48736 1102 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 NAGLUP54802 743 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 TARDBPQ13148 414 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 AMZ1Q400G9 498 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 UNC50Q53HI1 259 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 THEMIS2Q5TEJ8 643 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 CDCP2Q5VXM1 449 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 WDR74Q6RFH5 385 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 OR6Y1Q8NGX8 325 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 WDR48Q8TAF3 677 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 ZNF483Q8TF39 744 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 NCSTNQ92542 709 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 PITPNM3Q9BZ71 974 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 FAM53CQ9NYF3 392 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 GPRC5BQ9NZH0 403 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 KCNE2Q9Y6J6 123 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 ASPMQ8IZT6 3477 aa19.12■□□□□ 0.65
PDLIM2-221ENST00000622702 MN1Q10571 1320 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 CPNE6O95741 557 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 FGF3P11487 239 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 PSMB5P28074 263 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 PRDX3P30048 256 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 CSF2RBP32927 897 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 ABATP80404 500 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 CFHR1Q03591 330 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 PRDX1Q06830 199 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 CDC16Q13042 620 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 SPIDRQ14159 915 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 PDK4Q16654 411 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 SLC5A12Q1EHB4 618 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 ICE2Q659A1 982 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 SPESP1Q6UW49 350 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 PLXDC1Q8IUK5 500 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 TEX9Q8N6V9 391 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 OR2L3Q8NG85 312 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 ZDHHC12Q96GR4 267 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 GFM1Q96RP9 751 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 CD180Q99467 661 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 DPYSL5Q9BPU6 564 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 ACAT2Q9BWD1 397 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 GATA5Q9BWX5 397 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 CAPS2Q9BXY5 557 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 INTS9Q9NV88 658 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 MSRB2Q9Y3D2 182 aa19.11■□□□□ 0.65
PDLIM2-221ENST00000622702 WDR91A4D1P6 747 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 NTN3O00634 580 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 CAPN5O15484 640 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 H2AFYO75367 372 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 SUPT7LO94864 414 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 CCNDBP1O95273 360 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 C9P02748 559 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 EPB42P16452 691 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 EPORP19235 508 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 PPM1FP49593 454 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 PPP1CAP62136 330 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 PCDH1Q08174 1060 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 GTF2H2Q13888 395 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 SF1Q15637 639 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 GTF2H2CQ6P1K8 395 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 RBM44Q6ZP01 1051 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 USP53Q70EK8 1073 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 COL27A1Q8IZC6 1860 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 CCNYL1Q8N7R7 359 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 DCBLD1Q8N8Z6 715 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 FAM76AQ8TAV0 307 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 GSTO2Q9H4Y5 243 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 ZBTB26Q9HCK0 441 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 ABCF3Q9NUQ8 709 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 ANGPTL3Q9Y5C1 460 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 WDFY3Q8IZQ1 3526 aa19.1■□□□□ 0.65
PDLIM2-221ENST00000622702 KATNA1O75449 491 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 GNAZP19086 355 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CMPK1P30085 196 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 ATP1A2P50993 1020 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CLCQ05315 142 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 CFAP157Q5JU67 520 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 IRGCQ6NXR0 463 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 TMEM71Q6P5X7 295 aa19.09■□□□□ 0.65
PDLIM2-221ENST00000622702 FRMD7Q6ZUT3 714 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms