RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SCAMP4Q969E2 229 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 EGLN2Q96KS0 407 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 HEPHQ9BQS7 1158 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 SPHK2Q9NRA0 654 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 HCFC1R1Q9NWW0 138 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 GPRC5BQ9NZH0 403 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 ERVW-1Q9UQF0 538 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 ATP11BQ9Y2G3 1177 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 PCDHGA8Q9Y5G5 932 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 NOTCH4Q99466 2003 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 PABPN1LA6NDY0 278 aaKnown RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 FADS2P1A8MWK0 482 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 RFXANKO14593 260 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 SLC16A6O15403 523 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 CCL16O15467 120 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 CXCL14O95715 111 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 B3GALT4O96024 378 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 TIMP1P01033 207 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 HSD3B1P14060 373 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 CSF2RAP15509 400 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 TIMP2P16035 220 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 GPX2P18283 190 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 ITPKAP23677 461 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 HSD3B2P26439 372 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 YAP1P46937 504 aaKnown RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 CHIT1Q13231 466 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 IL18R1Q13478 541 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 TUBA3CQ13748 450 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 ZNF77Q15935 545 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 UGT8Q16880 541 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 BROXQ5VW32 411 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 SHQ1Q6PI26 577 aaKnown RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 DPPA4Q7L190 304 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 RTL10Q7L3V2 364 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 TECPR1Q7Z6L1 1165 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 ANKRD46Q86W74 232 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 HIPK1Q86Z02 1210 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 HS3ST5Q8IZT8 346 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 CHDHQ8NE62 594 aaPredicted RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 ELMO1Q92556 727 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 GLMNQ92990 594 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 APOLD1Q96LR9 279 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 BRF2Q9HAW0 419 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 PCDH12Q9NPG4 1184 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 TDP1Q9NUW8 608 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 DKK3Q9UBP4 350 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 TMEFF2Q9UIK5 374 aaPredicted RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 SAMD4AQ9UPU9 718 aaKnown RBP9.15□□□□□ -0.95
PDPN-212ENST00000621990 NAALAD2Q9Y3Q0 740 aa9.15□□□□□ -0.95
PDPN-212ENST00000621990 LAMA3Q16787 3333 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ARHGEF33A8MVX0 844 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ABCB7O75027 752 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 MTX2O75431 263 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 LEFTY1O75610 366 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ATE1O95260 518 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ITGAMP11215 1152 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 GSTM2P28161 218 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ETV3P41162 512 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 TMBIM6P55061 237 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 HTRA4P83105 476 aaPredicted RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 KCNAB2Q13303 367 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 LAPTM5Q13571 262 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 PGS1Q32NB8 556 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 RFX4Q33E94 735 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ZNF658BQ4V348 819 aaPredicted RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 CPZQ66K79 652 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 OR4F3Q6IEY1 312 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 GRHL2Q6ISB3 625 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 LAIR2Q6ISS4 152 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CES5AQ6NT32 575 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 Q6ZVL8 140 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CAMKMTQ7Z624 323 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 BTN2A2Q8WVV5 523 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ATL1Q8WXF7 558 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 NCLNQ969V3 563 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 TCEAL4Q96EI5 215 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 LRIG1Q96JA1 1093 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 ING2Q9H160 280 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 FAM120CQ9NX05 1096 aaKnown RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 VPS29Q9UBQ0 182 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CIDEBQ9UHD4 219 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 C3orf18Q9UK00 162 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 KRT87PA6NCN2 255 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 TMEM202A6NGA9 273 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 B4GAT1O43505 415 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 NOBOXO60393 691 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 KCNK5O95279 499 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 GSNP06396 782 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 CTSLP07711 333 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 MYCLP1P12525 358 aaPredicted RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
PDPN-212ENST00000621990 RYKP34925 604 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 HNF4AP41235 474 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 HALP42357 657 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 MAPK9P45984 424 aa9.14□□□□□ -0.95
PDPN-212ENST00000621990 RECQLP46063 649 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms