RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FNBP1LQ5T0N5 605 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CCDC122Q5T0U0 273 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 LRRC38Q5VT99 294 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 FOXD4L5Q5VV16 416 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 TTLL10Q6ZVT0 673 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 GLT6D1Q7Z4J2 308 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 SLC13A5Q86YT5 568 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 SLC5A8Q8N695 610 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 AMER3Q8N944 861 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PLPP5Q8NEB5 264 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ELP5Q8TE02 316 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 FOXD4L4Q8WXT5 416 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 SYN2Q92777 582 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 RNASE6Q93091 150 aaKnown RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 THAP11Q96EK4 314 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 RNF157Q96PX1 679 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PANX2Q96RD6 677 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 COPS8Q99627 209 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 SH3GL2Q99962 352 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 FAM129AQ9BZQ8 928 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ZDHHC11Q9H8X9 412 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ARFGAP3Q9NP61 516 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CBLCQ9ULV8 474 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CHD3Q12873 2000 aaKnown RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 CACNA1CQ13936 2221 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 C3orf70A6NLC5 250 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 AURKAO14965 403 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 VPS26AO75436 327 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SOX30O94993 753 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CCNDBP1O95273 360 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SIX3O95343 332 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 TPOP07202 933 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ZNF24P17028 368 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CDK11BP21127 795 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 HLCSP50747 726 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 DLX5P56178 289 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TMPRSS15P98073 1019 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SLC10A2Q12908 348 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 TERF2Q15554 542 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TPD52L1Q16890 204 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 FIGNQ5HY92 759 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 DMRTA1Q5VZB9 504 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ARMC3Q5W041 872 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ARHGAP11AQ6P4F7 1023 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CPEB2Q7Z5Q1 589 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 CRLF3Q8IUI8 442 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 DCUN1D3Q8IWE4 304 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CFAP206Q8IYR0 622 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 BEST3Q8N1M1 668 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 PLD5Q8N7P1 536 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GOT1L1Q8NHS2 421 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 IGFBPL1Q8WX77 278 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 HSPH1Q92598 858 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 MRGPRX2Q96LB1 330 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 NPAS2Q99743 824 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CARD6Q9BX69 1037 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TSSK1BQ9BXA7 367 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SPHK1Q9NYA1 384 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 PLA2G3Q9NZ20 509 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 JKAMPQ9P055 326 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CSMD2Q7Z408 3487 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 OR2AG2A6NM03 316 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 C2orf81A6NN90 581 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 HCN1O60741 890 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GLSO94925 669 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 IL18BPO95998 194 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 HEXBP07686 556 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CTSBP07858 339 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 EZRP15311 586 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 ITGALP20701 1170 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ADSLP30566 484 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 AKT1P31749 480 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CYLC1P35663 651 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 CD96P40200 585 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CCNFP41002 786 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 KIR2DL3P43628 341 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 DCAF7P61962 342 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 EEF1A1P68104 462 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 EEF1A2Q05639 463 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 TBL3Q12788 808 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 MYBPHQ13203 477 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GRB7Q14451 532 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 KRT31Q15323 416 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 FOXD4L6Q3SYB3 417 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 EEF1A1P5Q5VTE0 462 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 FIGLAQ6QHK4 219 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 FAM151BQ6UXP7 276 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 FOXD4L3Q6VB84 417 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 NEK10Q6ZWH5 1172 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TMTC1Q8IUR5 882 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TMEM158Q8WZ71 300 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ZNF653Q96CK0 615 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 IQCDQ96DY2 449 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 RNF31Q96EP0 1072 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SIGLEC12Q96PQ1 595 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 OR1F2PQ96R84 312 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CLEC4MQ9H2X3 399 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 BZW2Q9Y6E2 419 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms