RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 INPP5DQ92835 1189 aa18.17■□□□□ 0.5
CDX1-202ENST00000616154 WDR54Q9H977 334 aa18.17■□□□□ 0.5
CDX1-202ENST00000616154 ENAMQ9NRM1 1142 aa18.17■□□□□ 0.5
CDX1-202ENST00000616154 INTS7Q9NVH2 962 aaKnown RBP18.17■□□□□ 0.5
CDX1-202ENST00000616154 MYO9AB2RTY4 2548 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 FAM187AA6NFU0 413 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 H3BMM5 538 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 MASP2O00187 686 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 SLU7O95391 586 aaKnown RBP18.16■□□□□ 0.5
CDX1-202ENST00000616154 ALBP02768 609 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 ESR1P03372 595 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 ALAS2P22557 587 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 MMP11P24347 488 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 ATP5DP30049 168 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 DR1Q01658 176 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 AIMP2Q13155 320 aaKnown RBP18.16■□□□□ 0.5
CDX1-202ENST00000616154 TMED2Q15363 201 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 ANKRD20A4Q4UJ75 823 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 YOD1Q5VVQ6 348 aaPredicted RBP18.16■□□□□ 0.5
CDX1-202ENST00000616154 PTRHD1Q6GMV3 140 aaKnown RBP18.16■□□□□ 0.5
CDX1-202ENST00000616154 TTLL10Q6ZVT0 673 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 CENPUQ71F23 418 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 OVCH1Q7RTY7 1134 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 MAATS1Q7Z4T9 603 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 CILP2Q8IUL8 1156 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 PPIL6Q8IXY8 311 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 KRT222Q8N1A0 295 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 ZADH2Q8N4Q0 377 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 SIGLEC10Q96LC7 697 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 IL17FQ96PD4 163 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 BARD1Q99728 777 aaKnown RBP18.16■□□□□ 0.5
CDX1-202ENST00000616154 SLC26A1Q9H2B4 701 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 SAMD15Q9P1V8 674 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.16■□□□□ 0.5
CDX1-202ENST00000616154 PCDHGA10Q9Y5H3 936 aa18.16■□□□□ 0.5
CDX1-202ENST00000616154 CACNA1DQ01668 2161 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 A1L4Q6 167 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 WIPF3A6NGB9 483 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 RASGRF2O14827 1237 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 DSCR3O14972 297 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 PFDN6O15212 129 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 RAD51CO43502 376 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 FKBP9O95302 570 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 PIM1P11309 404 aaPredicted RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 PTK6Q13882 451 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 GLE1Q53GS7 698 aaKnown RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 ZC3H12BQ5HYM0 836 aaKnown RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 TCTE1Q5JU00 501 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 FCRL6Q6DN72 434 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 NEPROQ6NW34 567 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 TAX1BP1Q86VP1 789 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 LMNTD2Q8IXW0 634 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 C2orf73Q8N5S3 287 aaPredicted RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 LMNTD1Q8N9Z9 388 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 CFAP61Q8NHU2 1237 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 ZNF285Q96NJ3 590 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 SPSB2Q99619 263 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 TRIM56Q9BRZ2 755 aaKnown RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 RAB11FIP5Q9BXF6 653 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 ZBTB20Q9HC78 741 aaPredicted RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 SLC6A20Q9NP91 592 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 CUTCQ9NTM9 273 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 CIDEBQ9UHD4 219 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 ERRFI1Q9UJM3 462 aaPredicted RBP18.15■□□□□ 0.5
CDX1-202ENST00000616154 FBXL4Q9UKA2 621 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 VPS9D1Q9Y2B5 631 aa18.15■□□□□ 0.5
CDX1-202ENST00000616154 TTI1O43156 1089 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 USP1O94782 785 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 LDLRP01130 860 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 ITGA3P26006 1051 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 IVDP26440 423 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 GRM7Q14831 915 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 SF1Q15637 639 aaKnown RBP18.14■□□□□ 0.49
CDX1-202ENST00000616154 NKG7Q16617 165 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 PRAMEF13Q5VWM6 474 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 FIGLAQ6QHK4 219 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 COX15Q7KZN9 410 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 CUZD1Q86UP6 607 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 SLC39A10Q9ULF5 831 aa18.14■□□□□ 0.49
CDX1-202ENST00000616154 COPG1Q9Y678 874 aaKnown RBP18.14■□□□□ 0.49
CDX1-202ENST00000616154 FITM1A5D6W6 292 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 ANKUB1A6NFN9 424 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 EFCAB8A8MWE9 144 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 GOLGA8KD6RF30 607 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 GOLGA8TH3BQL2 631 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 SOCS6O14544 535 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 DNALI1O14645 258 aaPredicted RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 PRICKLE3O43900 615 aaPredicted RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 EIF3BP55884 814 aaKnown RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 CASC4Q6P4E1 433 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 OTOAQ7RTW8 1153 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 MAMDC2Q7Z304 686 aaPredicted RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 TTC29Q8NA56 475 aaPredicted RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 ZUFSPQ96AP4 578 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 RAD51AP1Q96B01 352 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 ZNF669Q96BR6 464 aaPredicted RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 WDR77Q9BQA1 342 aaPredicted RBP18.13■□□□□ 0.49
CDX1-202ENST00000616154 SELENOSQ9BQE4 189 aa18.13■□□□□ 0.49
CDX1-202ENST00000616154 LRRC1Q9BTT6 524 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms