RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DNAAF5Q86Y56 855 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 EBPLQ9BY08 206 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 C14orf105Q9NVL8 296 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 AASSQ9UDR5 926 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ZFP37Q9Y6Q3 630 aaPredicted RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 NRLP54845 237 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 NAIF1Q69YI7 327 aaPredicted RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 TTC27Q6P3X3 843 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 TPRA1Q86W33 373 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PAQR7Q86WK9 346 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 SEC14L1Q92503 715 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 APOPT1Q96IL0 206 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PCDHB18PQ96TA0 734 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ARNT2Q9HBZ2 717 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 A0A1W2PRU2 124 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 AZIN1O14977 448 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 ICAM3P32942 547 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 GRIA4P48058 902 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 TMEM69Q5SWH9 247 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 NUFIP1Q9UHK0 495 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 SAP18O00422 153 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 SCAPQ12770 1279 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 SPATA6LQ8N4H0 392 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 GIMAP5Q96F15 307 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 SDHAF2Q9NX18 166 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 RARRES3Q9UL19 164 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 URB1O60287 2271 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 CNTNAP1P78357 1384 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 ZNF891A8MT65 544 aaPredicted RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 AGR2O95994 175 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CCL5P13501 91 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 ARSIQ5FYB1 569 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 RABEPKQ7Z6M1 372 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 LRRC34Q8IZ02 419 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 PRR18Q8N4B5 295 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 MAFIPQ8WZ33 124 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 AGO3Q9H9G7 860 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 HHATLQ9HCP6 504 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 LOC105369274A0A096LPK9 316 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 DIRAS3O95661 229 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 RRAS2P62070 204 aaPredicted RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 RGS21Q2M5E4 152 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 KCTD9Q7L273 389 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 OR4N4Q8N0Y3 316 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 MFSD8Q8NHS3 518 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 FBXL8Q96CD0 374 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 ZNF442Q9H7R0 627 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 SCN8AQ9UQD0 1980 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 PIK3CBP42338 1070 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 AKR1C2P52895 323 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 MSI2Q96DH6 328 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 MND1Q9BWT6 205 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CTPS2Q9NRF8 586 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CLCA1A8K7I4 914 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 A8MVJ9 347 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 H7C417 338 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 MATN1P21941 496 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 P2RX1P51575 399 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 OR4D2P58180 307 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 DLG4P78352 724 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CA9Q16790 459 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 BORAQ6PGQ7 559 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 OR5B12Q96R08 314 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 PCTPQ9UKL6 214 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 FCF1Q9Y324 198 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 PCDHA2Q9Y5H9 948 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 WNT9AO14904 365 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CD79AP11912 226 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 CRISP3P54108 245 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 PLA2G7Q13093 441 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 DHCR24Q15392 516 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 RBM48Q5RL73 367 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 SH3RF2Q8TEC5 729 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 TGM7Q96PF1 710 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
TCF4-248ENST00000616053 KCNQ5Q9NR82 932 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 ETNK2Q9NVF9 386 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 KLHL42Q9P2K6 505 aa12.35□□□□□ -0.43
TCF4-248ENST00000616053 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GJE1A6NN92 205 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 C9IYK1 514 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 MSI1O43347 362 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 GZMAP12544 262 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GJA9P57773 515 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms