RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TOP3BO95985 862 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 ALOX5P09917 674 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CDH1P12830 882 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CD247P20963 164 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 GDF5P43026 501 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 RBM15BQ8NDT2 890 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 DDHD1Q8NEL9 900 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 RHEBL1Q8TAI7 183 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 OBP2AQ9NY56 170 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 OARD1Q9Y530 152 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 C9JVG2 144 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 AXIN1O15169 862 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 RGS5O15539 181 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 FABP3P05413 133 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 GJA4P35212 333 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CRISP3P54108 245 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 C1orf61Q13536 156 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 MLIPQ5VWP3 458 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 STEAP4Q687X5 459 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 WDR36Q8NI36 951 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC38A4Q969I6 547 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC39A13Q96H72 371 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 TAPBPLQ9BX59 468 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 LYARQ9NX58 379 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 PPIEQ9UNP9 301 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 SCN9AQ15858 1988 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 CAPN14A8MX76 684 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 PTGES3LE9PB15 166 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 PRAMEF26H0Y7S4 382 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 EIF3FO00303 357 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 GSC2O15499 205 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 ARCN1P48444 511 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 CREB5Q02930 508 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 PTSQ03393 145 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 RALGDSQ12967 914 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 HERC3Q15034 1050 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 TRIM16LQ309B1 348 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 SUSD1Q6UWL2 747 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 TSPAN33Q86UF1 283 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 TMEM126BQ8IUX1 230 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 SUN3Q8TAQ9 357 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 KIAA1143Q96AT1 154 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF689Q96CS4 500 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 GEMIN8Q9NWZ8 242 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 SPATA7Q9P0W8 599 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 SATB2Q9UPW6 733 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 SH3GLB1Q9Y371 365 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 A0A087WXM4 84 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM86C2PA6NEL3 165 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 RFXAPO00287 272 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 OR6B1O95007 311 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 ANPEPP15144 967 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 MYOGP15173 224 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 FOXN2P32314 431 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 DPP6P42658 865 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF648Q5T619 568 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 LIPJQ5W064 366 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 DPPA4Q7L190 304 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC29A4Q7RTT9 530 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 OXR1Q8N573 874 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 KLHL25Q9H0H3 589 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 NOL6Q9H6R4 1146 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 AKTIPQ9H8T0 292 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 FZD3Q9NPG1 666 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 NECTIN3Q9NQS3 549 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 MOCS1Q9NZB8 636 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 CDH22Q9UJ99 828 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 PRR23D1E9PI22 279 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM189A1O60320 539 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 PRR23D2P0DMB1 279 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 TALDO1P37837 337 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 UNC5DQ6UXZ4 953 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 GPR149Q86SP6 731 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 HIPK1Q86Z02 1210 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 GSTCDQ8NEC7 633 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 GRIP2Q9C0E4 1043 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 N6AMT1Q9Y5N5 214 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 NUMBLQ9Y6R0 609 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 DOCK1Q14185 1865 aa9.18□□□□□ -0.94
CLTCL1-208ENST00000615606 MATN2O00339 956 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 KRT36O76013 467 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 GPIP06744 558 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 CD1DP15813 335 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 IL7RP16871 459 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 TNFRSF4P43489 277 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 RAB8AP61006 207 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 TDGQ13569 410 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SIX1Q15475 284 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC9B1Q4ZJI4 515 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC44A4Q53GD3 710 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF678Q5SXM1 525 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 AMIGO2Q86SJ2 522 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 TMEM173Q86WV6 379 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SPPL2CQ8IUH8 684 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 OR10A6Q8NH74 314 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 LPGAT1Q92604 370 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 OSBPL10Q9BXB5 764 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 CWH43Q9H720 699 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms