RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 LOC110117498-PIK3R3F6TDL0 507 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 PAGE1O75459 146 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 OLFM2O95897 454 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 MT-CYBP00156 380 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 MT-ND2P03891 347 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 ABCB1P08183 1280 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 FDXRP22570 491 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 CASP2P42575 452 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 CLK1P49759 484 aaKnown RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 SUOXP51687 545 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 CSNK2BP67870 215 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 MRPS15P82914 257 aaKnown RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 RAPSNQ13702 412 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 TRIP4Q15650 581 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 CCDC58Q4VC31 144 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 PIK3R3Q92569 461 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 DEPDC7Q96QD5 511 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 KLF16Q9BXK1 252 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 FSD1LQ9BXM9 530 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 ITPAQ9BY32 194 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 OR12D3Q9UGF7 316 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 PEX16Q9Y5Y5 336 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 MAU2Q9Y6X3 613 aa21.36■■□□□ 1.01
POLR2J3-220ENST00000613744 CRYZL1O95825 349 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 UROSP10746 265 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 ENDOUP21128 410 aaKnown RBP21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 CDKN2DP55273 166 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 OR2B6P58173 313 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 RALGPS2Q86X27 583 aaPredicted RBP21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 KCNA7Q96RP8 456 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 APOL4Q9BPW4 351 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 CLPBQ9H078 707 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 MFSD1Q9H3U5 465 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 GSTA4O15217 222 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 MTHFD2P13995 350 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 EFNA1P20827 205 aaPredicted RBP21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 SOX11P35716 441 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 VIPR2P41587 438 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 PRIM2P49643 509 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 TYSND1Q2T9J0 566 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 PARP16Q8N5Y8 322 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 FAM83FQ8NEG4 500 aaPredicted RBP21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 SETD6Q8TBK2 473 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 ADAMTS19Q8TE59 1207 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 SUSD6Q92537 303 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 SLC39A13Q96H72 371 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 PDLIM5Q96HC4 596 aaKnown RBP21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 ZNF583Q96ND8 569 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 ATOH8Q96SQ7 321 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 CCDC32Q9BV29 185 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 C1QTNF3Q9BXJ4 246 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 TMA7Q9Y2S6 64 aaKnown RBP21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 PCDHB14Q9Y5E9 798 aa21.35■■□□□ 1.01
POLR2J3-220ENST00000613744 PPP6CO00743 305 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 MBTPS2O43462 519 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 STC2O76061 302 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 MFN2O95140 757 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 DDX6P26196 483 aaKnown RBP eCLIP21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 IST1P53990 364 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 FAM78AQ5JUQ0 283 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 ANKS6Q68DC2 871 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 ZCCHC8Q6NZY4 707 aaKnown RBP21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 CCDC81Q6ZN84 652 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 HORMAD1Q86X24 394 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 KBTBD8Q8NFY9 601 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 OR2T12Q8NG77 320 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 PROKR1Q8TCW9 393 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 HCAR2Q8TDS4 363 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 CLIP3Q96DZ5 547 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 SIGLEC11Q96RL6 698 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 PIF1Q9H611 641 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 CARS2Q9HA77 564 aaKnown RBP21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 HEBP1Q9NRV9 189 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 TDP1Q9NUW8 608 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 ADGRE2Q9UHX3 823 aa21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 CAB39Q9Y376 341 aaPredicted RBP21.34■■□□□ 1.01
POLR2J3-220ENST00000613744 SIX3O95343 332 aaPredicted RBP21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 S1PR4O95977 384 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 RETP07949 1114 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 SLC2A3P11169 496 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 SLC7A9P82251 487 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 ATP6AP1LQ52LC2 224 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 FAM219BQ5XKK7 198 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 ENPP6Q6UWR7 440 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 ATPAF2Q8N5M1 289 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 ANKK1Q8NFD2 765 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 SH3RF2Q8TEC5 729 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 DDX28Q9NUL7 540 aaKnown RBP21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 CFAP97Q9P2B7 532 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 LIMD1Q9UGP4 676 aa21.33■■□□□ 1.01
POLR2J3-220ENST00000613744 LEFTY2O00292 366 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 MATN3O15232 486 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 KLKB1P03952 638 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 RPS17P08708 135 aaKnown RBP21.33■■□□□ 1
POLR2J3-220ENST00000613744 M6PRP20645 277 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 P2RX3P56373 397 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 DGCR6Q14129 220 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 NKG7Q16617 165 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 DUSP7Q16829 419 aa21.33■■□□□ 1
POLR2J3-220ENST00000613744 PFKFB4Q16877 469 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms