RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PRAMEF9Q5VWM5 478 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CYB5D1Q6P9G0 228 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PAOXQ6QHF9 649 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 LRRC56Q8IYG6 542 aaPredicted RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 TBC1D21Q8IYX1 336 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 RGL4Q8IZJ4 473 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SIX5Q8N196 739 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 FNDC5Q8NAU1 212 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 KYQ8NBH2 561 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PPFIBP2Q8ND30 876 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 OR5AR1Q8NGP9 310 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 HMGCLL1Q8TB92 370 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SELENOMQ8WWX9 145 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 WDR92Q96MX6 357 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 HHIPQ96QV1 700 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 OR2M4Q96R27 311 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SLC25A23Q9BV35 468 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SGPP1Q9BX95 441 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 TRIT1Q9H3H1 467 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 OSGEPL1Q9H4B0 414 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 ELOVL6Q9H5J4 265 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 C6orf106Q9H6K1 298 aaPredicted RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CARS2Q9HA77 564 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 FGF22Q9HCT0 170 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 MRPL40Q9NQ50 206 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 FARSBQ9NSD9 589 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 AIG1Q9NVV5 245 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 TMEM45AQ9NWC5 275 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 C2orf42Q9NWW7 574 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 NDE1Q9NXR1 346 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 DMTF1Q9Y222 760 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 KCNK6Q9Y257 313 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CA5BQ9Y2D0 317 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CCL27Q9Y4X3 112 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 GPR45Q9Y5Y3 372 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 GON4LQ3T8J9 2241 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 ZNF839A8K0R7 811 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 E7EQ34 232 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 MGRN1O60291 552 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 PDYNP01213 254 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 NPPBP16860 134 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 ITGAXP20702 1163 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 RABIFP47224 123 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 RAP1GDS1P52306 607 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 THOP1P52888 689 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 DIO3P55073 304 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 RAB15P59190 212 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 PRKG2Q13237 762 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 ART3Q13508 389 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 DOC2AQ14183 400 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 E2F2Q14209 437 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 UAP1L1Q3KQV9 507 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 PDCD4Q53EL6 469 aaKnown RBP8.62□□□□□ -1.03
CCDC47-207ENST00000612558 SGO1Q5FBB7 561 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 FRG2Q64ET8 278 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 GRHL2Q6ISB3 625 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 C16orf89Q6UX73 402 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 GCNT7Q6ZNI0 430 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 GK5Q6ZS86 529 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 Q6ZSR6 202 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 SCUBE1Q8IWY4 988 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 UBALD2Q8IYN6 164 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 TMEM145Q8NBT3 493 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 FAM13CQ8NE31 585 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 TSPEARQ8WU66 669 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 RCN3Q96D15 328 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
CCDC47-207ENST00000612558 C12orf66Q96MD2 445 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 FRG2BQ96QU4 278 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 FERD3LQ96RJ6 166 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 HBEGFQ99075 208 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 THTPAQ9BU02 230 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 GPR174Q9BXC1 333 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 MRPL1Q9BYD6 325 aaKnown RBP8.62□□□□□ -1.03
CCDC47-207ENST00000612558 FOXQ1Q9C009 403 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 BRINP2Q9C0B6 783 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 EBF2Q9HAK2 575 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 CCDC177Q9NQR7 707 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-207ENST00000612558 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 NOP53Q9NZM5 478 aaKnown RBP8.62□□□□□ -1.03
CCDC47-207ENST00000612558 SPATA7Q9P0W8 599 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 WDR37Q9Y2I8 494 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 TDRKHQ9Y2W6 561 aaKnown RBP8.62□□□□□ -1.03
CCDC47-207ENST00000612558 DYRK1BQ9Y463 629 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 PLEKHM1Q9Y4G2 1056 aa8.62□□□□□ -1.03
CCDC47-207ENST00000612558 BBIP1A8MTZ0 92 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PDZK1P1A8MUH7 402 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NPIPB8E9PQR5 432 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 H0YIV9 168 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NRP2O60462 931 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SLC22A3O75751 556 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RSL1D1O76021 490 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ERGP11308 486 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SLC2A4P14672 509 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PCSK2P16519 638 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CD22P20273 847 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PRPH2P23942 346 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NUDT2P50583 147 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CTBSQ01459 385 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 HMGCS1Q01581 520 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms