RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SYT12Q8IV01 421 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 RAVER1Q8IY67 606 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 GLB1L3Q8NCI6 653 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 TNIP2Q8NFZ5 429 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 MCOLN3Q8TDD5 553 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZNF641Q96N77 438 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 HEPHQ9BQS7 1158 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 ING2Q9H160 280 aa13.66□□□□□ -0.22
PCDHGA3-202ENST00000612467 HELZP42694 1942 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 A0A1W2PPW3 197 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 PABPN1LA6NDY0 278 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 AXIN1O15169 862 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 LAMP1P11279 417 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 SYN1P17600 705 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 POLR2EP19388 210 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 CYP2A7P20853 494 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 AQP1P29972 269 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 VIPR1P32241 457 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 MEF2AQ02078 507 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 FOXD4Q12950 439 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 KCNAB2Q13303 367 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 ACOX1Q15067 660 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 IER5LQ5T953 404 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 FAM180BQ6P0A1 224 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 GPR180Q86V85 440 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 PLPP6Q8IY26 295 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 UGT2B28Q9BY64 529 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 DCAF13Q9NV06 445 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 PRKAB1Q9Y478 270 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 MAGEB17A8MXT2 336 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 KPNA3O00505 521 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 HOXB9P17482 250 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 MATN1P21941 496 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 GTF2H3Q13889 308 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 CEP68Q76N32 757 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 CALHM3Q86XJ0 350 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 MAL2Q969L2 176 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 SH3KBP1Q96B97 665 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 PANX1Q96RD7 426 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 FANCEQ9HB96 536 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 FAM118AQ9NWS6 357 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 GULP1Q9UBP9 304 aa13.65□□□□□ -0.22
PCDHGA3-202ENST00000612467 TCF20Q9UGU0 1960 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 C16orf96A6NNT2 1141 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 ARHGEF15O94989 841 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 ABCB1P08183 1280 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 CEBPBP17676 345 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 ENGP17813 658 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 FSHRP23945 695 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 DCTP40126 519 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 VIPR2P41587 438 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 WNT3P56703 355 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 HKDC1Q2TB90 917 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZBED5Q49AG3 693 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 FGD3Q5JSP0 725 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 HENMT1Q5T8I9 393 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 AGTRAPQ6RW13 159 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 GPR149Q86SP6 731 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 L3MBTL4Q8NA19 623 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 DNAJB9Q9UBS3 223 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 A0A096LPI6 279 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 TRIM64CA6NLI5 447 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 WASH3PC4AMC7 463 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 FPGTO14772 594 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 NTRK1P04629 796 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 COX7A2P14406 83 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 XPAP23025 273 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 KIR3DL1P43629 444 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 CATSPEREQ5SY80 951 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 LAIR2Q6ISS4 152 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM220Q6QAJ8 160 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 PARS2Q7L3T8 475 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 METTL3Q86U44 580 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 CHPFQ8IZ52 775 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM132CQ8N3T6 1108 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 NXPE3Q969Y0 559 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 RSPRY1Q96DX4 576 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 CMTM7Q96FZ5 175 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 PKP4Q99569 1192 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 OSBPL10Q9BXB5 764 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM45AQ9NWC5 275 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 STOX2Q9P2F5 926 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 DGKBQ9Y6T7 804 aa13.64□□□□□ -0.23
PCDHGA3-202ENST00000612467 TRIM64A6NGJ6 449 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 H3BMQ9 156 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 JUPP14923 745 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 NRIP1P48552 1158 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms