RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CHIT1Q13231 466 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 CLCA4Q14CN2 919 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 RGMBQ6NW40 437 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 SNX20Q7Z614 316 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 HSH2DQ96JZ2 352 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 DACH2Q96NX9 599 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-207ENST00000612273 PTPRDP23468 1912 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 TBX1O43435 398 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 UGT2B11O75310 529 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 ZDHHC11BP0C7U3 371 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 JUNBP17275 347 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-207ENST00000612273 ACRV1P26436 265 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 FCGRTP55899 365 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 CYP4F8P98187 520 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 MRPL58Q14197 206 aaKnown RBP13.66□□□□□ -0.22
COL6A1-207ENST00000612273 COLEC12Q5KU26 742 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 LRRC66Q68CR7 880 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 SLC22A16Q86VW1 577 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 CPPED1Q9BRF8 314 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-207ENST00000612273 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-207ENST00000612273 ASPSCR1Q9BZE9 553 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 RERGLQ9H628 205 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 ZDHHC6Q9H6R6 413 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 STARD7Q9NQZ5 370 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 RNF186Q9NXI6 227 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
COL6A1-207ENST00000612273 NINQ8N4C6 2090 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 PRAMEF4O60810 478 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 UGT2B4P06133 528 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 EPORP19235 508 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 PCMT1P22061 227 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 ST13P50502 369 aaKnown RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 MAD2L1Q13257 205 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 SPATS1Q496A3 300 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 PRAMEF9Q5VWM5 478 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 RNF180Q86T96 592 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 CADM3Q8N126 398 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 CLIP4Q8N3C7 705 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 RMND5AQ9H871 391 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 MARCH7Q9H992 704 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 CAB39Q9Y376 341 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 KPNA4O00629 521 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 TRBC1P01850 177 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 DNTTP04053 509 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 LAMP1P11279 417 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 CD6P30203 668 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 WEE1P30291 646 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 TUBA3CQ13748 450 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 GBX1Q14549 363 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF846Q147U1 533 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 FXNQ16595 210 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 GPRC6AQ5T6X5 926 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 CERS6Q6ZMG9 384 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 HIPK1Q86Z02 1210 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 LILRA3Q8N6C8 439 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 ZHX1-C8orf76Q96EF9 292 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF641Q96N77 438 aaPredicted RBP13.65□□□□□ -0.22
COL6A1-207ENST00000612273 CASD1Q96PB1 797 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 HEPHQ9BQS7 1158 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 TAS2R16Q9NYV7 291 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 PMF1-BGLAPU3KQ54 211 aa13.65□□□□□ -0.22
COL6A1-207ENST00000612273 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 HMGA1P17096 107 aaKnown RBP13.65□□□□□ -0.23
COL6A1-207ENST00000612273 GTF2E2P29084 291 aaKnown RBP13.65□□□□□ -0.23
COL6A1-207ENST00000612273 KRT20P35900 424 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 FKBP1BP68106 108 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 IRF8Q02556 426 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 EPS8Q12929 822 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 LSRQ86X29 649 aaPredicted RBP13.65□□□□□ -0.23
COL6A1-207ENST00000612273 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 NLGN4XQ8N0W4 816 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 CACTIN-AS1Q8N1I8 211 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 ABHD8Q96I13 439 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 COPS8Q99627 209 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.23
COL6A1-207ENST00000612273 TANC1Q9C0D5 1861 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 PATJQ8NI35 1801 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 YY2O15391 372 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 RGS10O43665 173 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 EBLN1P0CF75 366 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 TPTEP56180 551 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 RPP38P78345 283 aaKnown RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 INAVAQ3KP66 663 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 TTLL9Q3SXZ7 439 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 DGKKQ5KSL6 1271 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 IER5LQ5T953 404 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 SLC44A2Q8IWA5 706 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 NXPE1Q8N323 547 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 AADATQ8N5Z0 425 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms