RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TGM5O43548 720 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 XPNPEP2O43895 674 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 TLL1O43897 1013 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 FGBP02675 491 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 IFNW1P05000 195 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 OCM2P0CE71 109 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 OCMP0CE72 109 aaPredicted RBP6.2□□□□□ -1.42
SNX13-213ENST00000611725 DCTP40126 519 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 ENTPD1P49961 510 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 CYP4F2P78329 520 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 LDLRAP1Q5SW96 308 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 C6orf141Q5SZD1 244 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 FAM46CQ5VWP2 391 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 AHSA2Q719I0 299 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 PAGE2Q7Z2X7 111 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 P2RY8Q86VZ1 359 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 CYP4Z1Q86W10 505 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 THOC6Q86W42 341 aaKnown RBP6.2□□□□□ -1.42
SNX13-213ENST00000611725 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 CPXM2Q8N436 756 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 PIK3C3Q8NEB9 887 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 HMGCLL1Q8TB92 370 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 CXorf40AQ8TE69 158 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 GIPC3Q8TF64 312 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 WBP2Q969T9 261 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 TOX2Q96NM4 488 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 RDH14Q9HBH5 336 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 FARSBQ9NSD9 589 aaKnown RBP6.2□□□□□ -1.42
SNX13-213ENST00000611725 KLHL42Q9P2K6 505 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 MED16Q9Y2X0 877 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 PRSS21Q9Y6M0 314 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 DIRAS1O95057 198 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 EPHX1P07099 455 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 JUPP14923 745 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 LHCGRP22888 699 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 HLA-FP30511 346 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 CSNK1DP48730 415 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 SGCGQ13326 291 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 SLBPQ14493 270 aaKnown RBP eCLIP6.2□□□□□ -1.42
SNX13-213ENST00000611725 RGS21Q2M5E4 152 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 KLHL23Q8NBE8 558 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 ZNF420Q8TAQ5 688 aaPredicted RBP6.2□□□□□ -1.42
SNX13-213ENST00000611725 LKAAEAR1Q8TD35 194 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 HSH2DQ96JZ2 352 aa6.2□□□□□ -1.42
SNX13-213ENST00000611725 PAIP2BQ9ULR5 123 aaKnown RBP6.2□□□□□ -1.42
SNX13-213ENST00000611725 TNFRSF11BO00300 401 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PLOD2O00469 737 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 LSM1O15116 133 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 OPN1SWP03999 348 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 RETP07949 1114 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 ANXA8P13928 327 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SDC1P18827 310 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 EPORP19235 508 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CCR7P32248 378 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CTSKP43235 329 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CDH12P55289 794 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DAB2P98082 770 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MYBPC3Q14896 1274 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MEP1AQ16819 746 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 TIMM50Q3ZCQ8 353 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 ARSIQ5FYB1 569 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 HTR3DQ70Z44 454 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 RBM23Q86U06 439 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 CARM1Q86X55 608 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 KRT73Q86Y46 540 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 GAB3Q8WWW8 586 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SORCS1Q8WY21 1168 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 GLYATL1Q969I3 302 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 LRIG1Q96JA1 1093 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PHF12Q96QT6 1004 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SLC46A2Q9BY10 475 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 KLHL28Q9NXS3 571 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MAGED1Q9Y5V3 778 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 POP7O75817 140 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 SLC16A8O95907 504 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CTSAP10619 480 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MYF6P23409 242 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SSR2P43308 183 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DEFA1P59665 94 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DEFA3P59666 94 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 C2orf80Q0P641 193 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DUOXA1Q1HG43 343 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DGKKQ5KSL6 1271 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 NEK5Q6P3R8 708 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 TRIM74Q86UV6 250 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 PTRH1Q86Y79 214 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 NPAS3Q8IXF0 933 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 WFIKKN2Q8TEU8 576 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 HDAC2Q92769 488 aaKnown RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 TEX37Q96LM6 180 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 UHRF1Q96T88 793 aaPredicted RBP6.19□□□□□ -1.42
SNX13-213ENST00000611725 OR51B5Q9H339 312 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 SPHK2Q9NRA0 654 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 TESMINQ9Y4I5 508 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 MAN1A2O60476 641 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 CBFA2T3O75081 653 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 IL12AP29459 219 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 APLP1P51693 650 aa6.19□□□□□ -1.42
SNX13-213ENST00000611725 TUBA3CQ13748 450 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms