RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MED13Q9UHV7 2174 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 TNRC6AQ8NDV7 1962 aaKnown RBP20.96■□□□□ 0.95
CBWD3-207ENST00000611426 POC1B-GALNT4F8VUJ3 575 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 KDM1AO60341 852 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 CAPN1P07384 714 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 TPBGLP0DKB5 382 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 PPARGP37231 505 aaPredicted RBP20.96■□□□□ 0.95
CBWD3-207ENST00000611426 PRAMEP78395 509 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 UBAP2LQ14157 1087 aaKnown RBP20.96■□□□□ 0.95
CBWD3-207ENST00000611426 FAM198BQ6UWH4 519 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.96■□□□□ 0.95
CBWD3-207ENST00000611426 SSU72Q9NP77 194 aaKnown RBP20.96■□□□□ 0.95
CBWD3-207ENST00000611426 SMYD2Q9NRG4 433 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 PLAGL1Q9UM63 463 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 TCAF1Q9Y4C2 921 aa20.96■□□□□ 0.95
CBWD3-207ENST00000611426 PCDHGA9Q9Y5G4 932 aaKnown RBP20.96■□□□□ 0.95
CBWD3-207ENST00000611426 ISM1B1AKI9 464 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 C9J4A7 227 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 OR2B3O76000 313 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 SERPINB9P50453 376 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 SLC18A1P54219 525 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 ACVR1Q04771 509 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 MGAT5Q09328 741 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 ATCAYQ86WG3 371 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 PPHLN1Q8NEY8 458 aaKnown RBP20.95■□□□□ 0.94
CBWD3-207ENST00000611426 CDKL2Q92772 493 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 MIB2Q96AX9 1013 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 CERS2Q96G23 380 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 TRIM56Q9BRZ2 755 aaKnown RBP20.95■□□□□ 0.94
CBWD3-207ENST00000611426 TSSK1BQ9BXA7 367 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 AP1M2Q9Y6Q5 423 aa20.95■□□□□ 0.94
CBWD3-207ENST00000611426 DOPEY2Q9Y3R5 2298 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 A0A0J9YY10 115 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 SHOX2O60902 331 aaPredicted RBP20.94■□□□□ 0.94
CBWD3-207ENST00000611426 INHBAP08476 426 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 CNTFP26441 200 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 CCR7P32248 378 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 HSPA14Q0VDF9 509 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 NCF4Q15080 339 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 TMED2Q15363 201 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 ZIC1Q15915 447 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 DEFB110Q30KQ9 67 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 CHRNA10Q9GZZ6 450 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 SPRTNQ9H040 489 aaPredicted RBP20.94■□□□□ 0.94
CBWD3-207ENST00000611426 MLXIPLQ9NP71 852 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 TREX1Q9NSU2 369 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 PADI2Q9Y2J8 665 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 IKBKGQ9Y6K9 419 aa20.94■□□□□ 0.94
CBWD3-207ENST00000611426 LRRK2Q5S007 2527 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 MAST4O15021 2626 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 IQANK1A0A1B0GTG1 560 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 CXorf49A8MYA2 514 aaPredicted RBP20.93■□□□□ 0.94
CBWD3-207ENST00000611426 GYS2P54840 703 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 SEMA3AQ14563 771 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 KIR2DS3Q14952 304 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 SLC22A15Q8IZD6 547 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 ZBTB2Q8N680 514 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 FLVCR1-AS1Q8TAF5 88 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 ASZ1Q8WWH4 475 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 ZNF669Q96BR6 464 aaPredicted RBP20.93■□□□□ 0.94
CBWD3-207ENST00000611426 MTBPQ96DY7 904 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 SGSM3Q96HU1 749 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 C17orf62Q9BQA9 187 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 CHRAC1Q9NRG0 131 aa20.93■□□□□ 0.94
CBWD3-207ENST00000611426 G3BP2Q9UN86 482 aaKnown RBP20.93■□□□□ 0.94
CBWD3-207ENST00000611426 TTLL8A6PVC2 850 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 CYSRT1A8MQ03 144 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 IQCF5A8MTL0 148 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 HCRTR1O43613 425 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 CBSLP0DN79 551 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 HPDP32754 393 aaPredicted RBP20.92■□□□□ 0.94
CBWD3-207ENST00000611426 CBSP35520 551 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 CD97P48960 835 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 SLC5A12Q1EHB4 618 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 AARS2Q5JTZ9 985 aaKnown RBP20.92■□□□□ 0.94
CBWD3-207ENST00000611426 LGSNQ5TDP6 509 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 C1orf189Q5VU69 101 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 MLIPQ5VWP3 458 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 ZNF385CQ66K41 422 aaPredicted RBP20.92■□□□□ 0.94
CBWD3-207ENST00000611426 KIAA0930Q6ICG6 404 aaPredicted RBP20.92■□□□□ 0.94
CBWD3-207ENST00000611426 MED25Q71SY5 747 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 LDB1Q86U70 411 aaPredicted RBP20.92■□□□□ 0.94
CBWD3-207ENST00000611426 PPM1NQ8N819 430 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 TMEM102Q8N9M5 508 aaPredicted RBP20.92■□□□□ 0.94
CBWD3-207ENST00000611426 CFAP61Q8NHU2 1237 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 CATSPERZQ9NTU4 200 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 IRAK4Q9NWZ3 460 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 TBK1Q9UHD2 729 aa20.92■□□□□ 0.94
CBWD3-207ENST00000611426 PRRC2CQ9Y520 2896 aaKnown RBP20.91■□□□□ 0.94
CBWD3-207ENST00000611426 H3BMH7 237 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 CEACAM4O75871 244 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 RPN2P04844 631 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 APOA4P06727 396 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 ATXN8OSP0DMR3 200 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 GABRA4P48169 554 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 RAB28P51157 221 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 RHBDD2Q6NTF9 364 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 RAB43Q86YS6 212 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 VRK3Q8IV63 474 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 CNTN4Q8IWV2 1026 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms