RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 N6AMT1Q9Y5N5 214 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ANKRD31Q8N7Z5 1873 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 LOC285095A0A1B0GVY8 99 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 G3V2L1 256 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 CLDN4O14493 209 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 GMFGO60234 142 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 IFNW1P05000 195 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 JUNP05412 331 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 FABP3P05413 133 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 HSD17B2P37059 387 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 BLVRAP53004 296 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 CDH12P55289 794 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 TAS2R50P59544 299 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 FOXM1Q08050 763 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 SLC13A2Q13183 592 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 SEMA3BQ13214 749 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PON2Q15165 354 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 NDUFA9Q16795 377 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 POMZP3Q6PJE2 187 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ARL10Q8N8L6 244 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 OR4K1Q8NGD4 311 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RAB7BQ96AH8 199 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 SLC22A18Q96BI1 424 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 AURKBQ96GD4 344 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 MPP4Q96JB8 637 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PLEKHG4BQ96PX9 1271 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 MCOLN1Q9GZU1 580 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 COQ10BQ9H8M1 238 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PAPOLBQ9NRJ5 636 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ATP6V1HQ9UI12 483 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 DNAJC15Q9Y5T4 150 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 DGKBQ9Y6T7 804 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 TCRBV21S2A2A0A5A6 115 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PDLIM1O00151 329 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 TNFRSF11BO00300 401 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PRAMEF12O95522 483 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 SRPRAP08240 638 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 LAMP2P13473 410 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ADRB3P13945 408 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ENGP17813 658 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 CD72P21854 359 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 NDUFS1P28331 727 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 NTSR1P30989 418 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RPL4P36578 427 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 CTSKP43235 329 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RPS9P46781 194 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RGS8P57771 180 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RPS21P63220 83 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PRR5P85299 388 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 EMX2Q04743 252 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 NFE2L1Q14494 772 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF234Q14588 700 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RFX4Q33E94 735 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 MPP7Q5T2T1 576 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 NAIF1Q69YI7 327 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 TICAM1Q8IUC6 712 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PGBD5Q8N414 524 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 PHOSPHO2Q8TCD6 241 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 RELTQ969Z4 430 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 REXO4Q9GZR2 422 aaKnown RBP7.08□□□□□ -1.28
CSDE1-218ENST00000610726 ARNT2Q9HBZ2 717 aa7.08□□□□□ -1.28
CSDE1-218ENST00000610726 GLOD5A6NK44 160 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ARPC2O15144 300 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SCN2BO60939 215 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 UGT2B17O75795 530 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TNFP01375 233 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 HNRNPCP07910 306 aaKnown RBP eCLIP7.07□□□□□ -1.283e-6■■■□□ 18.5
CSDE1-218ENST00000610726 IGFBP5P24593 272 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 PTX3P26022 381 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 FEN1P39748 380 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 RPL5P46777 297 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SLC6A11P48066 632 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SOX9P48436 509 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 NCBP2P52298 156 aaKnown RBP eCLIP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF155Q12901 538 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 IRAK1BP1Q5VVH5 260 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 CPXM2Q8N436 756 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 OR52L1Q8NGH7 329 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 SPPL3Q8TCT6 385 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 BCL7CQ8WUZ0 217 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 RGMAQ96B86 450 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ASB9Q96DX5 294 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 C6orf62Q9GZU0 229 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 LMAN2LQ9H0V9 348 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TRIM39Q9HCM9 518 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TREX1Q9NSU2 369 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 DLGAP4Q9Y2H0 992 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TAF1LQ8IZX4 1826 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 CPED1A4D0V7 1026 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 NOBOXO60393 691 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 RNGTTO60942 597 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 PRKD3O94806 890 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ABLIM3O94929 683 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 HMGA1P17096 107 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 POLR2CP19387 275 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 PGDP52209 483 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 ABRAXAS2Q15018 415 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 TRIM71Q2Q1W2 868 aaKnown RBP7.07□□□□□ -1.28
CSDE1-218ENST00000610726 BROXQ5VW32 411 aa7.07□□□□□ -1.28
CSDE1-218ENST00000610726 PLEKHM3Q6ZWE6 761 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms