RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TRIT1Q9H3H1 467 aaKnown RBP19.84■□□□□ 0.77
SSBP3-216ENST00000610401 SERHLQ9NQF3 203 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 TMEM184CQ9NVA4 438 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 THUMPD1Q9NXG2 353 aaKnown RBP19.84■□□□□ 0.77
SSBP3-216ENST00000610401 RHCGQ9UBD6 479 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 OGDHLQ9ULD0 1010 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 VPS9D1Q9Y2B5 631 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 SNPHO15079 494 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 NPPAP01160 153 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 TGM1P22735 817 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 ALDH7A1P49419 539 aaKnown RBP19.84■□□□□ 0.77
SSBP3-216ENST00000610401 PCBP2Q15366 365 aaKnown RBP eCLIP19.84■□□□□ 0.773e-9■■■■■ 49.5
SSBP3-216ENST00000610401 SYT12Q8IV01 421 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 ZBTB2Q8N680 514 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 SH3KBP1Q96B97 665 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 TTPALQ9BTX7 342 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 WDR37Q9Y2I8 494 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 HPRP00739 348 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 SDC1P18827 310 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 CR2P20023 1033 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 AZGP1P25311 298 aaKnown RBP19.83■□□□□ 0.77
SSBP3-216ENST00000610401 OR1D2P34982 312 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 FCGRTP55899 365 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 STEAP3Q658P3 488 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 PJA1Q8NG27 643 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 ASIC4Q96FT7 647 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 SH3GL1Q99961 368 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 C1QTNF3Q9BXJ4 246 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 EHD1Q9H4M9 534 aa19.83■□□□□ 0.77
SSBP3-216ENST00000610401 EXOSC4Q9NPD3 245 aaKnown RBP19.83■□□□□ 0.77
SSBP3-216ENST00000610401 PNMA8CA0A1B0GUJ8 204 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 SLC38A8A6NNN8 435 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 SAP18O00422 153 aaKnown RBP19.83■□□□□ 0.76
SSBP3-216ENST00000610401 SLC22A1O15245 554 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 RGS5O15539 181 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 CLDN9O95484 217 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 CD160O95971 181 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 FABP3P05413 133 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 COX7A2P14406 83 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 GRK5P34947 590 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 DMC1Q14565 340 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 DYNC2LI1Q8TCX1 351 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 MED8Q96G25 268 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 SLC22A12Q96S37 553 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 REEP1Q9H902 201 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 RLIMQ9NVW2 624 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 USE1Q9NZ43 259 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 SH3BP4Q9P0V3 963 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 TTC34A8MYJ7 566 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 DUSP11O75319 330 aaKnown RBP19.83■□□□□ 0.76
SSBP3-216ENST00000610401 VNN2O95498 520 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 STSP08842 583 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 RRM2P31350 389 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 TRPC1P48995 793 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 NFATC2Q13469 925 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 CDH18Q13634 790 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 PTCHD3Q3KNS1 767 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 CCDC92Q53HC0 331 aaPredicted RBP19.83■□□□□ 0.76
SSBP3-216ENST00000610401 VRK3Q8IV63 474 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 APCDD1Q8J025 514 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 C2orf69Q8N8R5 385 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 TRIB2Q92519 343 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 DMRTB1Q96MA1 342 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 CPPED1Q9BRF8 314 aaPredicted RBP19.83■□□□□ 0.76
SSBP3-216ENST00000610401 TPK1Q9H3S4 243 aa19.83■□□□□ 0.76
SSBP3-216ENST00000610401 UNCXA6NJT0 531 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 CCND3P30281 292 aaPredicted RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 HOXA9P31269 272 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 ZNF157P51786 506 aaPredicted RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 CDH4P55283 916 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 ZXDCQ2QGD7 858 aaPredicted RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 LRRC66Q68CR7 880 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 SLC44A2Q8IWA5 706 aaPredicted RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 CHPFQ8IZ52 775 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 GTPBP3Q969Y2 492 aaKnown RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 APOL4Q9BPW4 351 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 P2RY12Q9H244 342 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 PALMDQ9NP74 551 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 OLA1Q9NTK5 396 aaKnown RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 ERVK13-1Q9NX77 482 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 H3BNC9 293 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 SLC28A1O00337 649 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 KRT6AP02538 564 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 KRT6BP04259 564 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 DGKAP23743 735 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 CSKP41240 450 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 KRT6CP48668 564 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 ILF2Q12905 390 aaKnown RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 C1QTNF12Q5T7M4 302 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 SERPINA13PQ6UXR4 307 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 UBE2R2Q712K3 238 aaPredicted RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 C11orf74Q86VG3 221 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 CELF2-AS1Q8N7Q2 184 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 ZNF300Q96RE9 604 aaPredicted RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 SLIRPQ9GZT3 109 aaKnown RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 THG1LQ9NWX6 298 aaKnown RBP19.82■□□□□ 0.76
SSBP3-216ENST00000610401 QPCTLQ9NXS2 382 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 BTBD3Q9Y2F9 522 aa19.82■□□□□ 0.76
SSBP3-216ENST00000610401 KIR3DL1P43629 444 aa19.81■□□□□ 0.76
SSBP3-216ENST00000610401 TOP3AQ13472 1001 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms