RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 BLOC1S5-TXNDC5H3BN57 136 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 SIX3O95343 332 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 IGHV4-59P01825 116 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 VIMP08670 466 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM86B2P0C5J1 330 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 VAMP7P51809 220 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 CLDN15P56746 228 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 KCNJ10P78508 379 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 CDR2Q01850 454 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 ILF2Q12905 390 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 TUBB2AQ13885 445 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 SQLEQ14534 574 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 HERC3Q15034 1050 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 RRS1Q15050 365 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 NONOQ15233 471 aaKnown RBP eCLIP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 PTGISQ16647 500 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 CTU2Q2VPK5 515 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 KRTAP24-1Q3LI83 254 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM174BQ3ZCQ3 159 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 LACTB2Q53H82 288 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 XKR3Q5GH77 459 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 SLC35D3Q5M8T2 416 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 ARHGEF16Q5VV41 709 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 OR4A47Q6IF82 309 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 NRARPQ7Z6K4 114 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 PIGZQ86VD9 579 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 DZIP1Q86YF9 867 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 TIGD4Q8IY51 512 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 SIX6OS1Q8N1H7 587 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 NOA1Q8NC60 698 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 OR13C3Q8NGS6 347 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 OCC1Q8TAD7 63 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 HEXDCQ8WVB3 486 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 ERO1AQ96HE7 468 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 TUBB2BQ9BVA1 445 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 SNX25Q9H3E2 840 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 CPVLQ9H3G5 476 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 CHST11Q9NPF2 352 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 INTS9Q9NV88 658 aaKnown RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 RASAL2Q9UJF2 1139 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 NAP1L2Q9ULW6 460 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 TNNQ9UQP3 1299 aa3.87□□□□□ -1.79
SMCHD1-213ENST00000609587 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 BICDL2A1A5D9 508 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 PSMA7O14818 248 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 DFFBO76075 338 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 DDHD2O94830 711 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 PGLSO95336 258 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 SLU7O95391 586 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 RPN1P04843 607 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 ZFYP08048 801 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 CD27P26842 260 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 CDKN1AP38936 164 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 WNT5AP41221 380 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 RGS7P49802 495 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 GCNT1Q02742 428 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 RASGEF1BQ0VAM2 473 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 TNK1Q13470 666 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 PTK6Q13882 451 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 GTDC1Q4AE62 458 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 LBHQ53QV2 105 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF329Q86UD4 541 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 RAD54LQ92698 747 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 EXOC4Q96A65 974 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 GIMAP5Q96F15 307 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 CCDC114Q96M63 670 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 PGLYRP2Q96PD5 576 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 CCDC3Q9BQI4 270 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 MTMR12Q9C0I1 747 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 RSPH9Q9H1X1 276 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 CHKBQ9Y259 395 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 STK36Q9NRP7 1315 aa3.86□□□□□ -1.79
SMCHD1-213ENST00000609587 H0Y626 953 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 TRMUO75648 421 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 CLPTM1O96005 669 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 SP1P08047 785 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 CD48P09326 243 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 PRSS56P0CW18 603 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 SPP1P10451 314 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 DARSP14868 501 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 CASTP20810 708 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 CHRNB4P30926 498 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 MAP2K2P36507 400 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 MFAP3P55082 362 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 PTENP60484 403 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 TUBB4BP68371 445 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 SLC25A53Q5H9E4 307 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF449Q6P9G9 518 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 TMEM182Q6ZP80 229 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 MSANTD1Q6ZTZ1 278 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 GET4Q7L5D6 327 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 AMIGO1Q86WK6 493 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 TRIM58Q8NG06 486 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 OR4C3Q8NH37 302 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 HPSE2Q8WWQ2 592 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 SUSD6Q92537 303 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 CORO2AQ92828 525 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 MR1Q95460 341 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms