RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 USP17L22D6RA61 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L17D6RBQ6 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L19D6RCP7 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L20D6RJB6 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZMPSTE24O75844 475 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 GPR143P51810 404 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP17L24Q0WX57 530 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PXDC1Q5TGL8 231 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 OR1J4Q8NGS1 313 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NANPQ8TBE9 248 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ENGP17813 658 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 DLSTP36957 453 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ATP4BP51164 291 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NADK2Q4G0N4 442 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 HIST2H3PS2Q5TEC6 136 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP49Q70CQ1 688 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 STPG2Q8N412 459 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TSEN2Q8NCE0 465 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 GTPBP3Q969Y2 492 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 TRIB1Q96RU8 372 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 RANBP9Q96S59 729 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SPATA9Q9BWV2 254 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TMEM14AQ9Y6G1 99 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 F8VP50 259 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ARR3P36575 388 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ENTPD1P49961 510 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CLCQ05315 142 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SOHLH1Q5JUK2 328 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TAPT1Q6NXT6 567 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF527Q8NB42 609 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PURBQ96QR8 312 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 TMEM185BQ9H7F4 350 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PRKAB2O43741 272 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 C4BPAP04003 597 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 FCGRTP55899 365 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 LAPTM4AQ15012 233 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PUS10Q3MIT2 529 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 OR5W2Q8NH69 310 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 RRNAD1Q96FB5 475 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 MFFQ9GZY8 342 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CCSER2Q9H7U1 834 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 LRTM1Q9HBL6 345 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 GSKIPQ9P0R6 139 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TMX2Q9Y320 296 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 RGS11O94810 467 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 C2orf80Q0P641 193 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 HLXQ14774 488 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 PARP15Q460N3 678 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 N4BP2L1Q5TBK1 243 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 LCLAT1Q6UWP7 414 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 CMIPQ8IY22 773 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 NARFQ9UHQ1 456 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ZNF639Q9UID6 485 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 USP31Q70CQ4 1352 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 ARVCFO00192 962 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 SUPT20HL2P0C7V6 817 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 VAMP2P63027 116 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 TCP10Q12799 353 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 ATP6AP1Q15904 470 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 VARS2Q5ST30 1063 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 MCMBPQ9BTE3 642 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 PPIL3Q9H2H8 161 aaKnown RBP3.32□□□□□ -1.88
NEB-218ENST00000603639 MYOZ2Q9NPC6 264 aa3.32□□□□□ -1.88
NEB-218ENST00000603639 M0R036 132 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 RAB40ALP0C0E4 278 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 CDK10Q15131 360 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 TIGD2Q4W5G0 525 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 RPL13AP3Q6NVV1 102 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 FAM183BPQ6ZVS7 135 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 PRSS48Q7RTY5 328 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 SHKBP1Q8TBC3 707 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 RAB40AQ8WXH6 277 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 KCNJ9Q92806 393 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 SNAPC3Q92966 411 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 KATNB1Q9BVA0 655 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 RNF121Q9H920 327 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 MCCC2Q9HCC0 563 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 FBXO4Q9UKT5 387 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 FBXO7Q9Y3I1 522 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 ZNF175Q9Y473 711 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 TMEM72A0PK05 275 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 PHOX2AO14813 284 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 RETP07949 1114 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 CSF3P09919 207 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 IDH2P48735 452 aaKnown RBP3.31□□□□□ -1.88
NEB-218ENST00000603639 HPCAP84074 193 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 NR6A1Q15406 480 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 GPR19Q15760 415 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 CHRNA2Q15822 529 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 PAPD4Q6PIY7 484 aaKnown RBP3.31□□□□□ -1.88
NEB-218ENST00000603639 CHMP1BQ7LBR1 199 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 CHTF18Q8WVB6 975 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 XAGE5Q8WWM1 108 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 GMEB2Q9UKD1 530 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 TAF6LQ9Y6J9 622 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 AHSGP02765 367 aa3.31□□□□□ -1.88
NEB-218ENST00000603639 CDH1P12830 882 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms