RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SATB2Q9UPW6 733 aa9.13□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ACTL7BQ9Y614 415 aa9.13□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KCNE2Q9Y6J6 123 aa9.13□□□□□ -0.95
SQSTM1P1-201ENST00000603451 MED19A0JLT2 244 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 FAM149AA5PLN7 773 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SLC9B1P1A6NJY1 282 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 EFCAB7A8K855 629 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 STX16-NPEPL1H3BU86 382 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TXNDC9O14530 226 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 STX16O14662 325 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 POLR1CO15160 346 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KIF1CO43896 1103 aaKnown RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SRPX2O60687 465 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KATNA1O75449 491 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 STK16O75716 305 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GUCA1CO95843 209 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 MYZAPP0CAP1 466 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ST6GAL1P15907 406 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GNAZP19086 355 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TAC1P20366 129 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 MAGP20916 626 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GRK3P35626 688 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GRIA3P42263 894 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PGGT1BP53609 377 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 EMP3P54852 163 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PPP1CAP62136 330 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 IRF9Q00978 393 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 NAE1Q13564 534 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 E2F2Q14209 437 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 MAP7Q14244 749 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 NAA30Q147X3 362 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SETDB1Q15047 1291 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 OR4D1Q15615 310 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KIF26BQ2KJY2 2108 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PTCHD3Q3KNS1 767 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TBC1D25Q3MII6 688 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KRT71Q3SY84 523 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SNAP47Q5SQN1 464 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 YOD1Q5VVQ6 348 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ZNF425Q6IV72 752 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SH2D5Q6ZV89 423 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 RNF44Q7L0R7 432 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TRABD2AQ86V40 505 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PPP1R3BQ86XI6 285 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 FAM129CQ86XR2 697 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SLC22A9Q8IVM8 553 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TBC1D19Q8N5T2 526 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ABHD11Q8NFV4 315 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GATA6Q92908 595 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ZNF501Q96CX3 271 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 MED8Q96G25 268 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PRR11Q96HE9 360 aaPredicted RBP9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 RUFY1Q96T51 708 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PLCD4Q9BRC7 762 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 C1QTNF3Q9BXJ4 246 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PELI2Q9HAT8 420 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ASCL3Q9NQ33 180 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TMEM184CQ9NVA4 438 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 WWOXQ9NZC7 414 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 CD274Q9NZQ7 290 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TAC3Q9UHF0 121 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 IKZF3Q9UKT9 509 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GRID1Q9ULK0 1009 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SRPK3Q9UPE1 567 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PCDHB3Q9Y5E6 796 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 AP1M2Q9Y6Q5 423 aa9.12□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KCNE1BA0A087WTH5 132 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 TRABD2BA6NFA1 517 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GOLGA6L10A6NI86 522 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 A8MU76 341 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SUPT3HB4E1H0 165 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 COPEO14579 308 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 CASC3O15234 703 aaKnown RBP9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 UGDHO60701 494 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SMIM24O75264 130 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SUPT3HO75486 399 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 HBQ1P09105 142 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 FGF3P11487 239 aaPredicted RBP9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 MTHFD2P13995 350 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GFAPP14136 432 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 H2AFXP16104 143 aaPredicted RBP9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 NPPBP16860 134 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 KRT4P19013 534 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 CXCR2P25025 360 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PSMB5P28074 263 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 HPDP32754 393 aaPredicted RBP9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 CRHR1P34998 444 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SLCO1A2P46721 670 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 GABRA4P48169 554 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SEPHS1P49903 392 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 ITGA1P56199 1179 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 CLDN6P56747 220 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 RPS15AP62244 130 aaKnown RBP9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 SLC18A2Q05940 514 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 CDC16Q13042 620 aa9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 FASTKQ14296 549 aaKnown RBP9.11□□□□□ -0.95
SQSTM1P1-201ENST00000603451 PCBP2Q15366 365 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms