RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 C17orf64Q86WR6 236 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 GKN2Q86XP6 184 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 MAML2Q8IZL2 1156 aaPredicted RBP17.39■□□□□ 0.37
VRK3-225ENST00000601912 TMEM105Q8N8V8 129 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 LCN9Q8WX39 176 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 REPS1Q96D71 796 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 WDR34Q96EX3 536 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PPP3R2Q96LZ3 170 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 XKR8Q9H6D3 395 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 ACTR5Q9H9F9 607 aaPredicted RBP17.39■□□□□ 0.37
VRK3-225ENST00000601912 TAC3Q9UHF0 121 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 FBXO4Q9UKT5 387 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 DOLKQ9UPQ8 538 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 ICKQ9UPZ9 632 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PRAMEF33A0A0G2JMD5 474 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 HNRNPCL1O60812 293 aaKnown RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 UNC5CO95185 931 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 CBX6O95503 412 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 CELA2BP08218 269 aaPredicted RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 PRR35P0CG20 571 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 ESRRAP11474 423 aaPredicted RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 RASSF2P50749 326 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 STX1BP61266 288 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 IRX1P78414 480 aaPredicted RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 KLF10Q13118 480 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 E2F2Q14209 437 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 NR6A1Q15406 480 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 PMS2CLQ68D20 193 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 Q6ZSR9 355 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 AMIGO1Q86WK6 493 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 LINC01555Q8NAE3 123 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 FAM46DQ8NEK8 389 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 OR2T11Q8NH01 316 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 MTFMTQ96DP5 389 aaKnown RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 HBEGFQ99075 208 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 ACAT2Q9BWD1 397 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 FARSBQ9NSD9 589 aaKnown RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 POT1Q9NUX5 634 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 ARL8BQ9NVJ2 186 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 OR6C2Q9NZP2 312 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 PCDHB11Q9Y5F2 797 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 COPG1Q9Y678 874 aaKnown RBP17.38■□□□□ 0.37
VRK3-225ENST00000601912 VCANP13611 3396 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 THADAQ6YHU6 1953 aa17.38■□□□□ 0.37
VRK3-225ENST00000601912 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 PDYNP01213 254 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 CD22P20273 847 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 CALB2P22676 271 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 VARSP26640 1264 aaKnown RBP17.37■□□□□ 0.37
VRK3-225ENST00000601912 SCTRP47872 440 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 SQLEQ14534 574 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 SPRED3Q2MJR0 410 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 CATSPEREQ5SY80 951 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 C10orf62Q5T681 223 aaPredicted RBP17.37■□□□□ 0.37
VRK3-225ENST00000601912 MED27Q6P2C8 311 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 TREML1Q86YW5 311 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 SDR16C5Q8N3Y7 309 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 LMX1AQ8TE12 382 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 UBE2E3Q969T4 207 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 CMTM5Q96DZ9 223 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 MARK4Q96L34 752 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 NRTNQ99748 197 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 ZNF385DQ9H6B1 395 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 CAAP1Q9H8G2 361 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 PRM3Q9NNZ6 103 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 SLC40A1Q9NP59 571 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 CPNE7Q9UBL6 633 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 TAGLN3Q9UI15 199 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 KNL1Q8NG31 2342 aa17.37■□□□□ 0.37
VRK3-225ENST00000601912 SPAG17Q6Q759 2223 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 A0A1B0GTW7 788 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 A0A1W2PPV9 198 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SERTM1A2A2V5 107 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 T-ENOLP0DO92 83 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 EZRP15311 586 aaKnown RBP17.36■□□□□ 0.37
VRK3-225ENST00000601912 ATP4BP51164 291 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 NEK2P51955 445 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 ERVK-8P63133 956 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SRSF5Q13243 272 aaKnown RBP17.36■□□□□ 0.37
VRK3-225ENST00000601912 PLCL1Q15111 1095 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 RPS6KA2Q15349 733 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 GSTA3Q16772 222 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 C6orf136Q5SQH8 315 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SLC9B2Q86UD5 537 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 KRT78Q8N1N4 520 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SFRP1Q8N474 314 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 FNDC5Q8NAU1 212 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 OR4E2Q8NGC2 313 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 ZDHHC1Q8WTX9 485 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SRMSQ9H3Y6 488 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 PELI2Q9HAT8 420 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 GIMAP2Q9UG22 337 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SUSD2Q9UGT4 822 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SH2B3Q9UQQ2 575 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 PCM1Q15154 2024 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 LSM1O15116 133 aaKnown RBP17.36■□□□□ 0.37
VRK3-225ENST00000601912 CDH1P12830 882 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 IDO1P14902 403 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 CXCR2P25025 360 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 PRDX6P30041 224 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms