RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 ISM1B1AKI9 464 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 EPB42P16452 691 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 UGT2B7P16662 529 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 MEF2AQ02078 507 aaPredicted RBP22.11■■□□□ 1.13
IRF3-227ENST00000600911 ASPHQ12797 758 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 LCP2Q13094 533 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 AASDHQ4L235 1098 aaPredicted RBP22.11■■□□□ 1.13
IRF3-227ENST00000600911 TCHHL1Q5QJ38 904 aaPredicted RBP22.11■■□□□ 1.13
IRF3-227ENST00000600911 KIAA1614Q5VZ46 1190 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 SH3KBP1Q96B97 665 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 ABCG4Q9H172 646 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 RABEP2Q9H5N1 569 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 SYNPO2LQ9H987 977 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 MID1IP1Q9NPA3 183 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 RNF11Q9Y3C5 154 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 ANGPTL3Q9Y5C1 460 aa22.11■■□□□ 1.13
IRF3-227ENST00000600911 MDC1Q14676 2089 aaKnown RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 PIPSLA2A3N6 862 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 GSAPA4D1B5 854 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 PRAMEF10O60809 474 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 H2AFYO75367 372 aaKnown RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 PROS1P07225 676 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 CDH1P12830 882 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 CSF2RBP32927 897 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 PIK3CGP48736 1102 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 GFERP55789 205 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 BIRC2Q13490 618 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 ICE2Q659A1 982 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 ATG16L1Q676U5 607 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 EFL1Q7Z2Z2 1120 aaKnown RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 TMPRSS9Q7Z410 1059 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 SPRED1Q7Z699 444 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 MTERF4Q7Z6M4 381 aaKnown RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 TRIM42Q8IWZ5 723 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 RAB42Q8N4Z0 105 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 RHBDD1Q8TEB9 315 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 SETD7Q8WTS6 366 aaKnown RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 KLHL25Q9H0H3 589 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 THAP1Q9NVV9 213 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 KCNK4Q9NYG8 393 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 TMEM9Q9P0T7 183 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 MARCOQ9UEW3 520 aaPredicted RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 HCN4Q9Y3Q4 1203 aa22.1■■□□□ 1.13
IRF3-227ENST00000600911 ZFHX2Q9C0A1 2572 aaPredicted RBP22.1■■□□□ 1.13
IRF3-227ENST00000600911 HSPA4LO95757 839 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 CKMT1AP12532 417 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 HOXB3P14651 431 aaPredicted RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 PVRP15151 417 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 GRK6P43250 576 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 SF3A3Q12874 501 aaKnown RBP eCLIP22.09■■□□□ 1.131e-6■■■■□ 19.4
IRF3-227ENST00000600911 CLEC6AQ6EIG7 209 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 ADNP2Q6IQ32 1131 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 METTL2BQ6P1Q9 378 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 SLCO4C1Q6ZQN7 724 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 TMPRSS11BQ86T26 416 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 OR2L3Q8NG85 312 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 SREK1Q8WXA9 508 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 CNDP2Q96KP4 475 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 ZNF382Q96SR6 550 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 FGFR1OP2Q9NVK5 253 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 KCNE1BA0A087WTH5 132 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 FAM221BA6H8Z2 402 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 ZNF839A8K0R7 811 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 FLRT2O43155 660 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 EDF1O60869 148 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 CBFA2T3O75081 653 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 JUNP05412 331 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 SERPINB3P29508 390 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 CAPZBP47756 277 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 CHIT1Q13231 466 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 DOC2AQ14183 400 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 SUZ12Q15022 739 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 AMZ1Q400G9 498 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 AVL9Q8NBF6 648 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 ZNF740Q8NDX6 193 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 BAHD1Q8TBE0 780 aaPredicted RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 SLC5A11Q8WWX8 675 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 THOC1Q96FV9 657 aaKnown RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 NTMT1Q9BV86 223 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.09■■□□□ 1.13
IRF3-227ENST00000600911 FIS1Q9Y3D6 152 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 TIMM22Q9Y584 194 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 PCDHB11Q9Y5F2 797 aa22.09■■□□□ 1.13
IRF3-227ENST00000600911 ADAMTS20P59510 1910 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 A0A1W2PQM1 296 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 KIF1CO43896 1103 aaKnown RBP22.08■■□□□ 1.13
IRF3-227ENST00000600911 KDM1AO60341 852 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 WFS1O76024 890 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 KITP10721 976 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 CD1CP29017 333 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 CCNG1P51959 295 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 PRDX1Q06830 199 aaKnown RBP22.08■■□□□ 1.13
IRF3-227ENST00000600911 SH2D4BQ5SQS7 431 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 OOSP2Q86WS3 158 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 NAXDQ8IW45 347 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 IFI44Q8TCB0 444 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 CCDC3Q9BQI4 270 aa22.08■■□□□ 1.13
IRF3-227ENST00000600911 ATXN7L1Q9ULK2 861 aaPredicted RBP22.08■■□□□ 1.13
IRF3-227ENST00000600911 ZNF292O60281 2723 aa22.08■■□□□ 1.12
IRF3-227ENST00000600911 DMXL1Q9Y485 3027 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms