RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 AIG1Q9NVV5 245 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 SCHIP1Q9P0W5 487 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 GPR45Q9Y5Y3 372 aa17.07■□□□□ 0.32
SHKBP1-224ENST00000600718 MXRA7P84157 204 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 MAD2L1Q13257 205 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 LAPTM5Q13571 262 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 NXPE4Q6UWF7 544 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 NRROSQ86YC3 692 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 LMNTD1Q8N9Z9 388 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 CCL4L1Q8NHW4 92 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 HMGCLL1Q8TB92 370 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 GPBAR1Q8TDU6 330 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 EFCAB11Q9BUY7 163 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 DLGAP2Q9P1A6 1054 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 GSC2O15499 205 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 MAP3K13O43283 966 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 RAB28P51157 221 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 BLKP51451 505 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 NEK2P51955 445 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 DIO3P55073 304 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 DNAL1Q4LDG9 190 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 PAGE2BQ5JRK9 111 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 SLC30A9Q6PML9 568 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 TMPRSS11BQ86T26 416 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 IQCHQ86VS3 1027 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 WDR20Q8TBZ3 569 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 SH3KBP1Q96B97 665 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 REPS1Q96D71 796 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 GSDMCQ9BYG8 508 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 BRINP2Q9C0B6 783 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 KIR3DX1Q9H7L2 352 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 LRTM1Q9HBL6 345 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 TMEM45AQ9NWC5 275 aa17.06■□□□□ 0.32
SHKBP1-224ENST00000600718 MEI4A8MW99 385 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 NPIPB8E9PQR5 432 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 SLC2A4P14672 509 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 CD1EP15812 388 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 PRPH2P23942 346 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 VARSP26640 1264 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 CD38P28907 300 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 PKLRP30613 574 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 HOXA6P31267 233 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 RACK1P63244 317 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 HMGCS1Q01581 520 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 SIGLEC14Q08ET2 396 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 CSTF3Q12996 717 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 STX5Q13190 355 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 HIST2H2ACQ16777 129 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 PDCD4Q53EL6 469 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 C10orf62Q5T681 223 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 HIST2H2AA3Q6FI13 130 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 MED27Q6P2C8 311 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 TLDC1Q6P9B6 456 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 PAOXQ6QHF9 649 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 PARGQ86W56 976 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 LONP2Q86WA8 852 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 C2orf73Q8N5S3 287 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 OR2L8Q8NGY9 312 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 CADM1Q9BY67 442 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 ACPTQ9BZG2 426 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 C1orf109Q9NX04 203 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 NOP53Q9NZM5 478 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 CCDC167Q9P0B6 97 aa17.05■□□□□ 0.32
SHKBP1-224ENST00000600718 A0A1W2PR77 199 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 A6NCN8 305 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 SEC22BO75396 215 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 RSL1D1O76021 490 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 EML2O95834 649 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 SNRPB2P08579 225 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 KRT16P08779 473 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 F3P13726 295 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 HSD3B1P14060 373 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 HSD3B2P26439 372 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CUL3Q13618 768 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 RFTN2Q52LD8 501 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CATSPEREQ5SY80 951 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 C17orf64Q86WR6 236 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 ZFAND4Q86XD8 727 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 OR52E1Q8NGJ3 308 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 FBXO27Q8NI29 283 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 EFCAB1Q9HAE3 211 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 SH2B3Q9UQQ2 575 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 EIF3LQ9Y262 564 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 SLCO1B1Q9Y6L6 691 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CCDC163A0A0D9SF12 145 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 A0A1W2PPV9 198 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CTSEP14091 401 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CPOXP36551 454 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 ELF3P78545 371 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 RIPK1Q13546 671 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 IL23RQ5VWK5 629 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CWF19L1Q69YN2 538 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 GK5Q6ZS86 529 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 FUNDC1Q8IVP5 155 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 PHACTR4Q8IZ21 702 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 LINC01555Q8NAE3 123 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 OR7G3Q8NG95 312 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 UBE2E3Q969T4 207 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CXorf40BQ96DE9 158 aa17.04■□□□□ 0.32
SHKBP1-224ENST00000600718 CMTM7Q96FZ5 175 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms