RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 A0A0J9YVX5 310 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 DYTNA2CJ06 578 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 IDSB3KWA1 339 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 FOXS1O43638 330 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 UNC5CO95185 931 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 C1orf105O95561 183 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 GOT2P00505 430 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 F10P00742 488 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 SNRPB2P08579 225 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 OR56A5P0C7T3 313 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ITGAMP11215 1152 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 AGAP20933 346 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 FDXRP22570 491 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 PSMB5P28074 263 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 CTNNA1P35221 906 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 SLC26A3P40879 764 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 GRIA1P42261 906 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 CSE1LP55060 971 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 GDF10P55107 478 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 TPM4P67936 248 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ARG2P78540 354 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 HSPA14Q0VDF9 509 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 TRIM14Q14142 442 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 PCOLCEQ15113 449 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 SF1Q15637 639 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 C3AR1Q16581 482 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.81□□□□□ -1.48
VRK3-220ENST00000600259 CCDC38Q502W7 563 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 TSTD2Q5T7W7 516 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 IRAK1BP1Q5VVH5 260 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 H3F3CQ6NXT2 135 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 UNC5DQ6UXZ4 953 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 RPTNQ6XPR3 784 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 RIPOR1Q6ZS17 1223 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ARHGEF18Q6ZSZ5 1173 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 RNF44Q7L0R7 432 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 TAX1BP1Q86VP1 789 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 DCUN1D3Q8IWE4 304 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 CHERPQ8IWX8 916 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 KRT222Q8N1A0 295 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 SIRT6Q8N6T7 355 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 AMER3Q8N944 861 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 FAM71DQ8N9W8 422 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 TTC29Q8NA56 475 aaPredicted RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 OR2L3Q8NG85 312 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 CFAP61Q8NHU2 1237 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 SLC35B2Q8TB61 432 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ASZ1Q8WWH4 475 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ALG3Q92685 438 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 VPS50Q96JG6 964 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 PPP1R2P1Q96PQ5 205 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 MIPEPQ99797 713 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 TGIF2Q9GZN2 237 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ENKD1Q9H0I2 346 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 ZNF700Q9H0M5 742 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 LRRC40Q9H9A6 602 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 INTS7Q9NVH2 962 aaKnown RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 MARCH4Q9P2E8 410 aaPredicted RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 ZNF282Q9UDV7 671 aaPredicted RBP5.81□□□□□ -1.48
VRK3-220ENST00000600259 SEC14L3Q9UDX4 400 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 PCDHA13Q9Y5I0 950 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 NFS1Q9Y697 457 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 DUSP10Q9Y6W6 482 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 NAV3Q8IVL0 2385 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 NUP210LQ5VU65 1888 aa5.81□□□□□ -1.48
VRK3-220ENST00000600259 NCOA6Q14686 2063 aaPredicted RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 NSG1A0A0A6YYJ2 146 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 A0A0U1RQJ8 604 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 TCRBV7S2A1N4TA0A589 114 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 C2orf72A6NCS6 295 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 H0YGG7 62 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 GOLGA6L19H0YKK7 550 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 ADAM10O14672 748 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 MAP2K7O14733 419 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 FFAR3O14843 346 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 GPR42O15529 346 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 PSMD3O43242 534 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 KDM1AO60341 852 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 SLC19A2O60779 497 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 PRAMEF2O60811 474 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 SUN1O94901 812 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 RASAL1O95294 804 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 CRYABP02511 175 aaKnown RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 ERGP11308 486 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 COX6B1P14854 86 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 CAPN3P20807 821 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 CTNNA2P26232 953 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 ARF3P61204 181 aaPredicted RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 PMP22Q01453 160 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 OCA2Q04671 838 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 KLF1Q13351 362 aaPredicted RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 DSG2Q14126 1118 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 FASTKQ14296 549 aaKnown RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 GBX1Q14549 363 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 MUM1Q2TAK8 710 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 ZNF425Q6IV72 752 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 MTFR2Q6P444 385 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 LDB1Q86U70 411 aaPredicted RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 LRRC57Q8N9N7 239 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms