RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ZNF483Q8TF39 744 aaPredicted RBP12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 TGM7Q96PF1 710 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 MAP3K3Q99759 626 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 HAUS8Q9BT25 410 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 ACAT2Q9BWD1 397 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 ERVK-6Q9BXR3 956 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 DNAJC11Q9NVH1 559 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 PCTPQ9UKL6 214 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 SH2B3Q9UQQ2 575 aa12.19□□□□□ -0.46
CHMP2A-206ENST00000600118 RP1P56715 2156 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 IGHV5-10-1A0A0J9YXX1 117 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 A0A0J9YY10 115 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 PCNX2A6NKB5 2137 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 BIRC5O15392 142 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 KIF1CO43896 1103 aaKnown RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 PRAMEF4O60810 478 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 TRIM13O60858 407 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 CCNDBP1O95273 360 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 ANKRD34CP0C6C1 535 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 HPDP32754 393 aaPredicted RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 GRIA3P42263 894 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 PPP2R2AP63151 447 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 CDC16Q13042 620 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 TSTA3Q13630 321 aaPredicted RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 E2F2Q14209 437 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 SF1Q15637 639 aaKnown RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 UNC50Q53HI1 259 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 HSP90B2PQ58FF3 399 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 THEMIS2Q5TEJ8 643 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 PRAMEF9Q5VWM5 478 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 LIPMQ5VYY2 423 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 KIAA1614Q5VZ46 1190 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 ZNF425Q6IV72 752 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 DHRS13Q6UX07 377 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 RBM44Q6ZP01 1051 aaKnown RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 FAM92BQ6ZTR7 304 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 ARHGAP22Q7Z5H3 698 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 ANKRD42Q8N9B4 389 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 ABHD11Q8NFV4 315 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 KLHL6Q8WZ60 621 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 SELENOSQ9BQE4 189 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 MECRQ9BV79 373 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 GATA5Q9BWX5 397 aaPredicted RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 CHRNA10Q9GZZ6 450 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 SEMA6CQ9H3T2 930 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 SLC6A20Q9NP91 592 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 NKIRAS1Q9NYS0 192 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 GPRC5BQ9NZH0 403 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 OPTCQ9UBM4 332 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 APOBEC2Q9Y235 224 aaKnown RBP12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 KCNE2Q9Y6J6 123 aa12.18□□□□□ -0.46
CHMP2A-206ENST00000600118 IGHV5-51A0A0C4DH38 117 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 OR2A25A4D2G3 310 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 PVRP15151 417 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 ST6GAL1P15907 406 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 EPB42P16452 691 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 HRH2P25021 359 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 MPSTP25325 297 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CMPK1P30085 196 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CCKBRP32239 447 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 PIK3CGP48736 1102 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 PPM1FP49593 454 aaPredicted RBP12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 NAGLUP54802 743 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 TRA2AQ13595 282 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 ZIC1Q15915 447 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 PDK4Q16654 411 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CCDC157Q569K6 752 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 SLCO4C1Q6ZQN7 724 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 GOLGA7Q7Z5G4 137 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 B3GNT8Q7Z7M8 397 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 C17orf64Q86WR6 236 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CACTIN-AS1Q8N1I8 211 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 TEX9Q8N6V9 391 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 OR4K1Q8NGD4 311 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 SLC5A11Q8WWX8 675 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 NEIL2Q969S2 332 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 MOCOSQ96EN8 888 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 WDR34Q96EX3 536 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 SLC41A2Q96JW4 573 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CCDC74BQ96LY2 380 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 NSUN5Q96P11 429 aaKnown RBP12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 GSTO2Q9H4Y5 243 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 SYNDIG1Q9H7V2 258 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 ZBTB26Q9HCK0 441 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 MLXIPLQ9NP71 852 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 MRPS30Q9NP92 439 aaKnown RBP12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 ACSS2Q9NR19 701 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 CUEDC1Q9NWM3 386 aaPredicted RBP12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 ANKMY1Q9P2S6 941 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 BTRCQ9Y297 605 aa12.17□□□□□ -0.46
CHMP2A-206ENST00000600118 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 DCDC2BA2VCK2 349 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 SLC9B1P1A6NJY1 282 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms