RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PHKG1Q16816 387 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 PTCHD3Q3KNS1 767 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 KBTBD12Q3ZCT8 623 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 ICE2Q659A1 982 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 MBOAT1Q6ZNC8 495 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 NKAPQ8N5F7 415 aaKnown RBP27.05■■□□□ 1.92
SSBP4-206ENST00000599699 MED8Q96G25 268 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 NDC1Q9BTX1 674 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 FAM129AQ9BZQ8 928 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 SLC6A20Q9NP91 592 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 CCDC177Q9NQR7 707 aaPredicted RBP27.05■■□□□ 1.92
SSBP4-206ENST00000599699 TXLNGQ9NUQ3 528 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 KLK4Q9Y5K2 254 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 SPTBP11277 2137 aa27.05■■□□□ 1.92
SSBP4-206ENST00000599699 EIF4E1BA6NMX2 242 aaKnown RBP27.04■■□□□ 1.92
SSBP4-206ENST00000599699 TERTO14746 1132 aaKnown RBP27.04■■□□□ 1.92
SSBP4-206ENST00000599699 CTSVO60911 334 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 AGXTP21549 392 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 POU4F1Q01851 419 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 PRDX1Q06830 199 aaKnown RBP27.04■■□□□ 1.92
SSBP4-206ENST00000599699 C1orf189Q5VU69 101 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 TMEM207Q6UWW9 146 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 CEP97Q8IW35 865 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 TTC9Q92623 222 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 EXTL1Q92935 676 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 ALKBH8Q96BT7 664 aaKnown RBP27.04■■□□□ 1.92
SSBP4-206ENST00000599699 TSPAN17Q96FV3 270 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 BBC3Q96PG8 261 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-206ENST00000599699 RUFY1Q96T51 708 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 RBBP8Q99708 897 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 ARHGAP9Q9BRR9 750 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 MCMBPQ9BTE3 642 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 GPR87Q9BY21 358 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 GPAMQ9HCL2 828 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 ARL15Q9NXU5 204 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 UTP6Q9NYH9 597 aaKnown RBP27.04■■□□□ 1.92
SSBP4-206ENST00000599699 SRPK3Q9UPE1 567 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 PCDHGA6Q9Y5G7 932 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 LOC400499M0QZD8 3231 aa27.04■■□□□ 1.92
SSBP4-206ENST00000599699 A0A0J9YVX5 310 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 H3BMH7 237 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 ATXN7O15265 892 aaPredicted RBP27.03■■□□□ 1.92
SSBP4-206ENST00000599699 NRP2O60462 931 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 ITGB2P05107 769 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 CDC20Q12834 499 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 USP10Q14694 798 aaKnown RBP27.03■■□□□ 1.92
SSBP4-206ENST00000599699 SOWAHCQ53LP3 525 aaPredicted RBP27.03■■□□□ 1.92
SSBP4-206ENST00000599699 TCTE1Q5JU00 501 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 LCN10Q6JVE6 187 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 AGTRAPQ6RW13 159 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 ADCK2Q7Z695 626 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 PDLIM5Q96HC4 596 aaKnown RBP27.03■■□□□ 1.92
SSBP4-206ENST00000599699 ATG10Q9H0Y0 220 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 ACTL8Q9H568 366 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 CAB39LQ9H9S4 337 aa27.03■■□□□ 1.92
SSBP4-206ENST00000599699 DHCR7Q9UBM7 475 aaKnown RBP27.03■■□□□ 1.92
SSBP4-206ENST00000599699 PTPN4P29074 926 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 SPRP35270 261 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-206ENST00000599699 VSX2P58304 361 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-206ENST00000599699 TBPL1P62380 186 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 ABATP80404 500 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 ERV3-1Q14264 604 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 TBR1Q16650 682 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 GRTP1Q5TC63 336 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 RHBDD2Q6NTF9 364 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 LRRC56Q8IYG6 542 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-206ENST00000599699 FMO2Q99518 471 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 DPH2Q9BQC3 489 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-206ENST00000599699 PLCD4Q9BRC7 762 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 TSPYL1Q9H0U9 437 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 POPDC3Q9HBV1 291 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 STARD5Q9NSY2 213 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 ANKMY1Q9P2S6 941 aa27.02■■□□□ 1.92
SSBP4-206ENST00000599699 FARSAQ9Y285 508 aaKnown RBP27.02■■□□□ 1.92
SSBP4-206ENST00000599699 OR2A25A4D2G3 310 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 C9J4A7 227 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 SRPX2O60687 465 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-206ENST00000599699 CREG1O75629 220 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 GUCA1CO95843 209 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 C1QAP02745 245 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 EIF2S1P05198 315 aaKnown RBP27.01■■□□□ 1.91
SSBP4-206ENST00000599699 ENO2P09104 434 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-206ENST00000599699 ALAS2P22557 587 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 PHBP35232 272 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 AP1S2P56377 157 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 RPS18P62269 152 aaKnown RBP27.01■■□□□ 1.91
SSBP4-206ENST00000599699 NAE1Q13564 534 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 ATP1A1-AS1Q5TC04 95 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 PRAMEF13Q5VWM6 474 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 ZNF517Q6ZMY9 492 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-206ENST00000599699 TTC29Q8NA56 475 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-206ENST00000599699 CATSPER2Q96P56 530 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 GPR22Q99680 433 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 ZFYVE21Q9BQ24 234 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 PCBD2Q9H0N5 130 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 NDOR1Q9UHB4 597 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 SNX7Q9UNH6 387 aa27.01■■□□□ 1.91
SSBP4-206ENST00000599699 NPEPPSL1A6NEC2 478 aa27■■□□□ 1.91
SSBP4-206ENST00000599699 CDC7O00311 574 aa27■■□□□ 1.91
SSBP4-206ENST00000599699 FAM155BO75949 473 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms