RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SAMD15Q9P1V8 674 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 B3GNT3Q9Y2A9 372 aa17.95■□□□□ 0.46
PNKP-213ENST00000599543 HEATR5BQ9P2D3 2071 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 SDR42E2A6NKP2 422 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 TARM1B6A8C7 271 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 AGPSO00116 658 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 ALBP02768 609 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 MLNP12872 115 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 ITGAXP20702 1163 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 MCM3P25205 808 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 ARNTP27540 789 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 MAGEA3P43357 314 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 SLC7A5Q01650 507 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 CKAP4Q07065 602 aaKnown RBP17.94■□□□□ 0.46
PNKP-213ENST00000599543 DHX9Q08211 1270 aaKnown RBP17.94■□□□□ 0.46
PNKP-213ENST00000599543 BBS9Q3SYG4 887 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 IQCKQ8N0W5 287 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 TM9SF4Q92544 642 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 NACC2Q96BF6 587 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 SNF8Q96H20 258 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 SIGLEC10Q96LC7 697 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 MIPEPQ99797 713 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 WDR54Q9H977 334 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 ATP13A2Q9NQ11 1180 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 TSR3Q9UJK0 312 aaKnown RBP17.94■□□□□ 0.46
PNKP-213ENST00000599543 FAM169AQ9Y6X4 670 aa17.94■□□□□ 0.46
PNKP-213ENST00000599543 MDC1Q14676 2089 aaKnown RBP17.94■□□□□ 0.46
PNKP-213ENST00000599543 KRT87PA6NCN2 255 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 TCP11X1B4DZS4 312 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 H3BMM5 538 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 PRICKLE3O43900 615 aaPredicted RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 MMP11P24347 488 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 ITGA3P26006 1051 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 PSMB5P28074 263 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 FMO4P31512 558 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 VSX2P58304 361 aaPredicted RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 AIMP2Q13155 320 aaKnown RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 TRADDQ15628 312 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 WHAMMP3Q1A5X7 153 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 TYSND1Q2T9J0 566 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 FAM214AQ32MH5 1076 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 CCSMST1Q4G0I0 132 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 ANKRD20A4Q4UJ75 823 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 HIBCHQ6NVY1 386 aaPredicted RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 OVCH1Q7RTY7 1134 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 ZNF572Q7Z3I7 529 aaPredicted RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 IGDCC3Q8IVU1 814 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 OR2L3Q8NG85 312 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 HMGCLL1Q8TB92 370 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 LPGAT1Q92604 370 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 FAM136AQ96C01 138 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 BIRC8Q96P09 236 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 ILKAPQ9H0C8 392 aaPredicted RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 ZNF552Q9H707 407 aaPredicted RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 SPATA7Q9P0W8 599 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 FBXL4Q9UKA2 621 aa17.93■□□□□ 0.46
PNKP-213ENST00000599543 NXT1Q9UKK6 140 aaKnown RBP17.93■□□□□ 0.46
PNKP-213ENST00000599543 FITM1A5D6W6 292 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 FAM187AA6NFU0 413 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 MASP2O00187 686 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 TP73O15350 636 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 SRPX2O60687 465 aaPredicted RBP17.92■□□□□ 0.46
PNKP-213ENST00000599543 CTSVO60911 334 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 NIPSNAP2O75323 286 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 ESR1P03372 595 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 PAMP19021 973 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 ATP5DP30049 168 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 SOX8P57073 446 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 NAA25Q14CX7 972 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 NKG7Q16617 165 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 KIAA0930Q6ICG6 404 aaPredicted RBP17.92■□□□□ 0.46
PNKP-213ENST00000599543 IGFL3Q6UXB1 125 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 PCGF5Q86SE9 256 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 TMEM151BQ8IW70 566 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 ZADH2Q8N4Q0 377 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 METTL27Q8N6F8 245 aaPredicted RBP17.92■□□□□ 0.46
PNKP-213ENST00000599543 KIF18AQ8NI77 898 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.92■□□□□ 0.46
PNKP-213ENST00000599543 ZNF285Q96NJ3 590 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 TCF12Q99081 682 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 SPSB2Q99619 263 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 ERP44Q9BS26 406 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 SLC26A1Q9H2B4 701 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 CTSFQ9UBX1 484 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 CRYL1Q9Y2S2 319 aa17.92■□□□□ 0.46
PNKP-213ENST00000599543 A0A0J9YVX5 310 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 E5RI56 91 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 KIF2AO00139 706 aaPredicted RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 ONECUT2O95948 504 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 CHRM3P20309 590 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 OGNP20774 298 aaKnown RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 ADARP55265 1226 aaKnown RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 MRPL49Q13405 166 aaKnown RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 MORF4L2Q15014 288 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 PLEKHN1Q494U1 663 aaPredicted RBP17.91■□□□□ 0.46
PNKP-213ENST00000599543 WASHC2DQ5SRD0 308 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 IRAK1BP1Q5VVH5 260 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 SHISA6Q6ZSJ9 500 aa17.91■□□□□ 0.46
PNKP-213ENST00000599543 COX15Q7KZN9 410 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms