RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 KLK4Q9Y5K2 254 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 A0A0J9YVX5 310 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 HYKKA2RU49 373 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 F8W8V4 182 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 FFAR3O14843 346 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 GPR42O15529 346 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 NIPSNAP2O75323 286 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 URI1O94763 535 aaPredicted RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 TSFMP43897 325 aaKnown RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 TTPAP49638 278 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 EIF3BP55884 814 aaKnown RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 KLC1Q07866 573 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 ZNF169Q14929 603 aaPredicted RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 TCTE1Q5JU00 501 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 WASHC2DQ5SRD0 308 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 SEL1L2Q5TEA6 688 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 AGAP7PQ5VUJ5 663 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 NLRP9Q7RTR0 991 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 TTC29Q8NA56 475 aaPredicted RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 HMGCLL1Q8TB92 370 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 SKA2Q8WVK7 121 aaPredicted RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 NACC2Q96BF6 587 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 THOC3Q96J01 351 aaKnown RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 BIRC8Q96P09 236 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 AGAP4Q96P64 663 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 CRB3Q9BUF7 120 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 RAB11FIP5Q9BXF6 653 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 LHPPQ9H008 270 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 GNPTGQ9UJJ9 305 aa14.01□□□□□ -0.17
IRF3-223ENST00000599223 NXT1Q9UKK6 140 aaKnown RBP14.01□□□□□ -0.17
IRF3-223ENST00000599223 FBN2P35556 2912 aa14□□□□□ -0.17
IRF3-223ENST00000599223 OR2A25A4D2G3 310 aa14□□□□□ -0.17
IRF3-223ENST00000599223 GOLGA8KD6RF30 607 aa14□□□□□ -0.17
IRF3-223ENST00000599223 GOLGA8TH3BQL2 631 aa14□□□□□ -0.17
IRF3-223ENST00000599223 KLHL41O60662 606 aa14□□□□□ -0.17
IRF3-223ENST00000599223 KLHL18O94889 574 aa14□□□□□ -0.17
IRF3-223ENST00000599223 F7P08709 466 aaPredicted RBP14□□□□□ -0.17
IRF3-223ENST00000599223 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.177e-7■■■■□ 25.3
IRF3-223ENST00000599223 ELOAQ14241 798 aaKnown RBP14□□□□□ -0.17
IRF3-223ENST00000599223 GBX1Q14549 363 aa14□□□□□ -0.17
IRF3-223ENST00000599223 PCID2Q5JVF3 399 aa14□□□□□ -0.17
IRF3-223ENST00000599223 CES3Q6UWW8 571 aa14□□□□□ -0.17
IRF3-223ENST00000599223 LINC00696Q6ZRV3 163 aa14□□□□□ -0.17
IRF3-223ENST00000599223 CCDC89Q8N998 374 aa14□□□□□ -0.17
IRF3-223ENST00000599223 CATSPER1Q8NEC5 780 aa14□□□□□ -0.17
IRF3-223ENST00000599223 STT3BQ8TCJ2 826 aa14□□□□□ -0.17
IRF3-223ENST00000599223 LPGAT1Q92604 370 aa14□□□□□ -0.17
IRF3-223ENST00000599223 RAD51AP1Q96B01 352 aa14□□□□□ -0.17
IRF3-223ENST00000599223 MFSD3Q96ES6 412 aa14□□□□□ -0.17
IRF3-223ENST00000599223 FRMD8P1Q9BZ68 369 aaPredicted RBP14□□□□□ -0.17
IRF3-223ENST00000599223 ZNF160Q9HCG1 818 aa14□□□□□ -0.17
IRF3-223ENST00000599223 EIF2B3Q9NR50 452 aaKnown RBP14□□□□□ -0.17
IRF3-223ENST00000599223 SEMA3GQ9NS98 782 aa14□□□□□ -0.17
IRF3-223ENST00000599223 SYBUQ9NX95 663 aa14□□□□□ -0.17
IRF3-223ENST00000599223 PAK5Q9P286 719 aa14□□□□□ -0.17
IRF3-223ENST00000599223 GALPQ9UBC7 116 aa14□□□□□ -0.17
IRF3-223ENST00000599223 JRKLQ9Y4A0 524 aa14□□□□□ -0.17
IRF3-223ENST00000599223 FAM169AQ9Y6X4 670 aa14□□□□□ -0.17
IRF3-223ENST00000599223 CSMD2Q7Z408 3487 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 IGKV1-8A0A0C4DH67 115 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 ARHGEF33A8MVX0 844 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 TARM1B6A8C7 271 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 FKBP9O95302 570 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 EIF2S1P05198 315 aaKnown RBP13.99□□□□□ -0.17
IRF3-223ENST00000599223 CELA2AP08217 269 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 ZGLP1P0C6A0 271 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 ERGP11308 486 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 PIM1P11309 404 aaPredicted RBP13.99□□□□□ -0.17
IRF3-223ENST00000599223 COX6A1P12074 109 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 ACPPP15309 386 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 MGAT1P26572 445 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 EFNA3P52797 238 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 TERF1P54274 439 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 SNRPNP63162 240 aaKnown RBP13.99□□□□□ -0.17
IRF3-223ENST00000599223 CDC16Q13042 620 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 TYSND1Q2T9J0 566 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 PRTGQ2VWP7 1150 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 VWA2Q5GFL6 755 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 OTOAQ7RTW8 1153 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 LAPTM4BQ86VI4 370 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 MPP5Q8N3R9 675 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 DNAJB14Q8TBM8 379 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 ZUFSPQ96AP4 578 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 PANX3Q96QZ0 392 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 SLX1AQ9BQ83 275 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 TRIM56Q9BRZ2 755 aaKnown RBP13.99□□□□□ -0.17
IRF3-223ENST00000599223 ACAT2Q9BWD1 397 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 AGPAT4Q9NRZ5 378 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 ZC3H7BQ9UGR2 993 aaKnown RBP13.99□□□□□ -0.17
IRF3-223ENST00000599223 ANAPC5Q9UJX4 755 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 C3orf18Q9UK00 162 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 OSGIN2Q9Y236 505 aa13.99□□□□□ -0.17
IRF3-223ENST00000599223 APCP25054 2843 aa13.98□□□□□ -0.17
IRF3-223ENST00000599223 IGLV3-12A0A075B6K2 115 aa13.98□□□□□ -0.17
IRF3-223ENST00000599223 TCRBV7S3A2A0A539 114 aa13.98□□□□□ -0.17
IRF3-223ENST00000599223 SRPX2O60687 465 aaPredicted RBP13.98□□□□□ -0.17
IRF3-223ENST00000599223 NDUFS3O75489 264 aa13.98□□□□□ -0.17
IRF3-223ENST00000599223 MATN4O95460 622 aa13.98□□□□□ -0.17
IRF3-223ENST00000599223 HPP00738 406 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms