RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 BCORP1Q8N888 145 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 LMNTD1Q8N9Z9 388 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 PPHLN1Q8NEY8 458 aaKnown RBP11.96□□□□□ -0.49
TRIM28-212ENST00000597995 RELTQ969Z4 430 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 MOCOSQ96EN8 888 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 SELENOSQ9BQE4 189 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 RUBCNLQ9H714 662 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 SYBUQ9NX95 663 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 CTSFQ9UBX1 484 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 SLC39A10Q9ULF5 831 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 NEU2Q9Y3R4 380 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 JRKLQ9Y4A0 524 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 KLK4Q9Y5K2 254 aa11.96□□□□□ -0.49
TRIM28-212ENST00000597995 TEP1Q99973 2627 aaKnown RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 HYKKA2RU49 373 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 ZG16O60844 167 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 AVILO75366 819 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 JRKO75564 520 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 KLHL18O94889 574 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 ACPPP15309 386 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 TPSB2P20231 275 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 MAGEA6P43360 314 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 OR1D4P47884 311 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 NPY2RP49146 381 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 VPS41P49754 854 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 TERF1P54274 439 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 CSE1LP55060 971 aaKnown RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 PRAMEP78395 509 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 OCA2Q04671 838 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 KCNJ11Q14654 390 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 NAA30Q147X3 362 aaPredicted RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 TPSAB1Q15661 275 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 CYP1B1Q16678 543 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 FASTKD1Q53R41 847 aaKnown RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 ATG9BQ674R7 924 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 ZNF324BQ6AW86 544 aaPredicted RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 LRRC8BQ6P9F7 803 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 SHISA6Q6ZSJ9 500 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 KRT222Q8N1A0 295 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 MPP5Q8N3R9 675 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 C2orf73Q8N5S3 287 aaPredicted RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 CFAP61Q8NHU2 1237 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 HMGCLL1Q8TB92 370 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 STT3BQ8TCJ2 826 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 RAD51AP1Q96B01 352 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 MFSD3Q96ES6 412 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 IL17FQ96PD4 163 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 CRB3Q9BUF7 120 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 KIFC1Q9BW19 673 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 IL22Q9GZX6 179 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 P2RY12Q9H244 342 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 CATSPERZQ9NTU4 200 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 OLAHQ9NV23 265 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 ZNF282Q9UDV7 671 aaPredicted RBP11.95□□□□□ -0.5
TRIM28-212ENST00000597995 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
TRIM28-212ENST00000597995 IGLV3-12A0A075B6K2 115 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 ARHGAP10A1A4S6 786 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 DYTNA2CJ06 578 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 MAP2K7O14733 419 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 CD3EAPO15446 510 aaKnown RBP11.94□□□□□ -0.5
TRIM28-212ENST00000597995 CTSVO60911 334 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 USP1O94782 785 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 ZGLP1P0C6A0 271 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 PRF1P14222 555 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 FDXRP22570 491 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 AOAHP28039 575 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 VSX2P58304 361 aaPredicted RBP11.94□□□□□ -0.5
TRIM28-212ENST00000597995 CDK16Q00536 496 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 KLC1Q07866 573 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 GPS1Q13098 491 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 ART3Q13508 389 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 TMED2Q15363 201 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 INAQ16352 499 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 MYO7BQ6PIF6 2116 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 LINC00696Q6ZRV3 163 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 CAND1Q86VP6 1230 aaKnown RBP11.94□□□□□ -0.5
TRIM28-212ENST00000597995 FJX1Q86VR8 437 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 KBTBD2Q8IY47 623 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 MAGOHBQ96A72 148 aaKnown RBP11.94□□□□□ -0.5
TRIM28-212ENST00000597995 MIEF2Q96C03 454 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 PBKQ96KB5 322 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 HOMER3Q9NSC5 361 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 BFARQ9NZS9 450 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 COPG2Q9UBF2 871 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 MAU2Q9Y6X3 613 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 FAM169AQ9Y6X4 670 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 APCP25054 2843 aa11.94□□□□□ -0.5
TRIM28-212ENST00000597995 TRAV17A0A0B4J275 112 aa11.93□□□□□ -0.5
TRIM28-212ENST00000597995 A0A1W2PQ72 361 aa11.93□□□□□ -0.5
TRIM28-212ENST00000597995 GOLGA8KD6RF30 607 aa11.93□□□□□ -0.5
TRIM28-212ENST00000597995 PRSS44E7EML9 344 aa11.93□□□□□ -0.5
TRIM28-212ENST00000597995 GOLGA8TH3BQL2 631 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms