RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SULT1C3Q6IMI6 304 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 DUS1LQ6P1R4 473 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 IYDQ6PHW0 289 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 TICAM1Q8IUC6 712 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 TRIM42Q8IWZ5 723 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 PDPRQ8NCN5 879 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 OR5AR1Q8NGP9 310 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 MAPK15Q8TD08 544 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 ATL1Q8WXF7 558 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 CCDC138Q96M89 665 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 RAB11FIP5Q9BXF6 653 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 ZNF768Q9H5H4 540 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 POT1Q9NUX5 634 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 WWOXQ9NZC7 414 aa11.68□□□□□ -0.54
SHKBP1-213ENST00000597325 WDR91A4D1P6 747 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 ZNF839A8K0R7 811 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 A8MT66 165 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 TARM1B6A8C7 271 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 G3V2L1 256 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 MYO1CO00159 1063 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 TRIM38O00635 465 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 YY2O15391 372 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 SIGLEC6O43699 453 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 IPO13O94829 963 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 EML2O95834 649 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 VIPP01282 170 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 BPGMP07738 259 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 DHRS4L1P0CG22 281 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 HNMTP50135 292 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 PRKAA2P54646 552 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 WDR4P57081 412 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 C3orf38Q5JPI3 329 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 LIPMQ5VYY2 423 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 RASGRP3Q8IV61 690 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 NUDCD3Q8IVD9 361 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 PTGR2Q8N8N7 351 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 PHC3Q8NDX5 983 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 OR9A1PQ8NGU1 263 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 DLG3Q92796 817 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 PHF21BQ96EK2 531 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 MECRQ9BV79 373 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 DUSP23Q9BVJ7 150 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 CAAP1Q9H8G2 361 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 UCKL1Q9NWZ5 548 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 GEMIN8Q9NWZ8 242 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 NCKIPSDQ9NZQ3 722 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 SCHIP1Q9P0W5 487 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 SPATA7Q9P0W8 599 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 SIRPGQ9P1W8 387 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 PCDHGA8Q9Y5G5 932 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 APCP25054 2843 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 F8P00451 2351 aa11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 ZFC3H1O60293 1989 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-213ENST00000597325 KIF26BQ2KJY2 2108 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 PMS2P1A4D2B8 440 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 STX16-NPEPL1H3BU86 382 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 STX16O14662 325 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 KLK8O60259 260 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 DLX3O60479 287 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 TRIM13O60858 407 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 SBK3P0C264 359 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 XRCC1P18887 633 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 RBMS1P29558 406 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 HSD17B2P37059 387 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 CASRP41180 1078 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 KCNC1P48547 511 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 PRKG2Q13237 762 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 SRSF6Q13247 344 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 SETDB1Q15047 1291 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 CHI3L2Q15782 390 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 TBR1Q16650 682 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 CFAP157Q5JU67 520 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 MBOAT1Q6ZNC8 495 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 USP53Q70EK8 1073 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 PTRH1Q86Y79 214 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 RBM12BQ8IXT5 1001 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 NAGSQ8N159 534 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 SFRP1Q8N474 314 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 TMEM151AQ8N4L1 468 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 KYQ8NBH2 561 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 UBTD2Q8WUN7 234 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 FBXL8Q96CD0 374 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 PKP4Q99569 1192 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 KIR3DX1Q9H7L2 352 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 OXSMQ9NWU1 459 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 NLGN3Q9NZ94 848 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 OGFRQ9NZT2 677 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 CIDEBQ9UHD4 219 aa11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 TNPO3Q9Y5L0 923 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-213ENST00000597325 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms