RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 PHF21BQ96EK2 531 aa21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 PCBD2Q9H0N5 130 aa21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 ZNF768Q9H5H4 540 aaKnown RBP21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 CNOT10Q9H9A5 744 aaKnown RBP21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 TMCO1Q9UM00 188 aa21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 SH2B3Q9UQQ2 575 aa21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 KLHL20Q9Y2M5 609 aa21.72■■□□□ 1.07
SNRNP70-204ENST00000595231 IGKV1-8A0A0C4DH67 115 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 SLC9B1P1A6NJY1 282 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 A8MT66 165 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 PRAMEF10O60809 474 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 SMIM24O75264 130 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 IPO13O94829 963 aaKnown RBP21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 FKBP9O95302 570 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 JUPP14923 745 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 GRIA3P42263 894 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 MAGOHP61326 146 aaKnown RBP21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 TARDBPQ13148 414 aaKnown RBP eCLIP21.71■■□□□ 1.072e-8■□□□□ 10.8
SNRNP70-204ENST00000595231 C16orf72Q14CZ0 275 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 MARCH9Q86YJ5 346 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 PTGR2Q8N8N7 351 aaPredicted RBP21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 SLC41A2Q96JW4 573 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 IQCGQ9H095 443 aaKnown RBP21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 KLHL25Q9H0H3 589 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 KLK4Q9Y5K2 254 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 KIF26BQ2KJY2 2108 aa21.71■■□□□ 1.07
SNRNP70-204ENST00000595231 HEATR5BQ9P2D3 2071 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 FAM149AA5PLN7 773 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 LRRC14BA6NHZ5 514 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 WDR47O94967 919 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 SIX3O95343 332 aaPredicted RBP21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 MAGP20916 626 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 SEPHS1P49903 392 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 NFKB2Q00653 900 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 MPP2Q14168 576 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 PCBP2Q15366 365 aaKnown RBP eCLIP21.7■■□□□ 1.063e-8■■■■□ 24.3
SNRNP70-204ENST00000595231 ZIC1Q15915 447 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 TTMPQ5BVD1 217 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 GALNT15Q8N3T1 639 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 FAM111AQ96PZ2 611 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 SLC6A20Q9NP91 592 aa21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 MRPS30Q9NP92 439 aaKnown RBP21.7■■□□□ 1.06
SNRNP70-204ENST00000595231 STX16-NPEPL1H3BU86 382 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 STX16O14662 325 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ZBTB11O95625 1053 aaPredicted RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 TAC1P20366 129 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ATP5F1P24539 256 aaPredicted RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 CMPK1P30085 196 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ABATP80404 500 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ZYG11AQ6WRX3 759 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ARMC2Q8NEN0 867 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 PKNOX2Q96KN3 472 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ATP6V1G3Q96LB4 118 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 HAUS8Q9BT25 410 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 CUEDC1Q9NWM3 386 aaPredicted RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 TMX2-CTNND1H3BSU7 103 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 DYNC1I1O14576 645 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 HGSO14964 777 aaPredicted RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 PRPF4O43172 522 aaKnown RBP eCLIP21.69■■□□□ 1.062e-11■■■□□ 17.2
SNRNP70-204ENST00000595231 NELFEP18615 380 aaKnown RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 EPORP19235 508 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ETV4P43268 484 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 FCRL6Q6DN72 434 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 DGLUCYQ7Z3D6 616 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 KMT5CQ86Y97 462 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 RDH11Q8TC12 318 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 NEIL2Q969S2 332 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ZUFSPQ96AP4 578 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 GRAMD1AQ96CP6 724 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 LIN37Q96GY3 246 aaPredicted RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 DPH7Q9BTV6 452 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 FAM60AQ9NP50 221 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 COPG2Q9UBF2 871 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 WASF3Q9UPY6 502 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 BTRCQ9Y297 605 aa21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 TNPO3Q9Y5L0 923 aaKnown RBP21.69■■□□□ 1.06
SNRNP70-204ENST00000595231 ADAMTS20P59510 1910 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 A0A1W2PNU3 283 aaPredicted RBP21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 K7EPI3 171 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 AGRPO00253 132 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 NRP2O60462 931 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 CCNT2O60583 730 aaKnown RBP21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 CPA3P15088 417 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 HSD11B2P80365 405 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 FIGLAQ6QHK4 219 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 LRRC70Q7Z2Q7 622 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 C17orf64Q86WR6 236 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 C19orf47Q8N9M1 422 aaKnown RBP21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 DNAJC11Q9NVH1 559 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 KCNE2Q9Y6J6 123 aa21.68■■□□□ 1.06
SNRNP70-204ENST00000595231 E2F3O00716 465 aa21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 HYAL3O43820 417 aaPredicted RBP21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 CCNDBP1O95273 360 aa21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 MYL2P10916 166 aa21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 EEF1DP29692 281 aaKnown RBP21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 PRKAA2P54646 552 aa21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 ZNF425Q6IV72 752 aa21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 METTL2BQ6P1Q9 378 aaKnown RBP21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 D2HGDHQ8N465 521 aa21.67■■□□□ 1.06
SNRNP70-204ENST00000595231 C1QTNF3Q9BXJ4 246 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms