RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	FAM169A	Q9Y6X4	670 aa		14.72	□□□□□ -0.05
RFX2-223	ENST00000592883	MYO7B	Q6PIF6	2116 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	ZSCAN5DP	P0CG00	497 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	ACPP	P15309	386 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	NMBR	P28336	390 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	CARS	P49589	748 aa	Known RBP	14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	EIF3B	P55884	814 aa	Known RBP	14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	SESN2	P58004	480 aa	Predicted RBP	14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	OCA2	Q04671	838 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	VWA2	Q5GFL6	755 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	PCID2	Q5JVF3	399 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	CTSL3P	Q5NE16	218 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	SEL1L2	Q5TEA6	688 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	RNF44	Q7L0R7	432 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	OTOA	Q7RTW8	1153 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	LAPTM4B	Q86VI4	370 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	HMGCLL1	Q8TB92	370 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	VPS50	Q96JG6	964 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	C10orf90	Q96M02	699 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	LMF1	Q96S06	567 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	TREX1	Q9NSU2	369 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	ZNF282	Q9UDV7	671 aa	Predicted RBP	14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	C3orf18	Q9UK00	162 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	KLK4	Q9Y5K2	254 aa		14.71	□□□□□ -0.05
RFX2-223	ENST00000592883	MAP2K7	O14733	419 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	FFAR3	O14843	346 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	GPR42	O15529	346 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	ZG16	O60844	167 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	RPS3	P23396	243 aa	Known RBP eCLIP	14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	PER3	P56645	1201 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	ZRSR2	Q15696	482 aa	Known RBP	14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	ATG9B	Q674R7	924 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	PRMT9	Q6P2P2	845 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	FBXO42	Q6P3S6	717 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	FAM180A	Q6UWF9	173 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	SLC13A5	Q86YT5	568 aa	Predicted RBP	14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	SRRM1	Q8IYB3	904 aa	Known RBP	14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	RAB42	Q8N4Z0	105 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	OR1N1	Q8NGS0	311 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	SLX1A	Q9BQ83	275 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	ACAT2	Q9BWD1	397 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	SYNPO2L	Q9H987	977 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	PLA2G3	Q9NZ20	509 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	PAK5	Q9P286	719 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	SCN2A	Q99250	2005 aa		14.7	□□□□□ -0.06
RFX2-223	ENST00000592883	OR2A25	A4D2G3	310 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883		H0YGG7	62 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	KPNA5	O15131	536 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	NDUFS3	O75489	264 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	COX6A1	P12074	109 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	FBL	P22087	321 aa	Known RBP	14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	RPL22	P35268	128 aa	Known RBP	14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	CCNF	P41002	786 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	ARF3	P61204	181 aa	Predicted RBP	14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	ARG2	P78540	354 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	MUM1	Q2TAK8	710 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	RPUSD3	Q6P087	351 aa	Known RBP	14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	FJX1	Q86VR8	437 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	LRRC6	Q86X45	466 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	KBTBD2	Q8IY47	623 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	OTUD6B	Q8N6M0	293 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	AMER2	Q8N7J2	671 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	CCDC89	Q8N998	374 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	BRIX1	Q8TDN6	353 aa	Known RBP	14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	PSMF1	Q92530	271 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	FAM136A	Q96C01	138 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	CABS1	Q96KC9	395 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	FOPNL	Q96NB1	174 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	BIRC8	Q96P09	236 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	ZFYVE21	Q9BQ24	234 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	DPH7	Q9BTV6	452 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	OLAH	Q9NV23	265 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	SPATA7	Q9P0W8	599 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	PTGFRN	Q9P2B2	879 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	MRFAP1	Q9Y605	127 aa		14.69	□□□□□ -0.06
RFX2-223	ENST00000592883	SCN3A	Q9NY46	2000 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	IGLV3-12	A0A075B6K2	115 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	NSG1	A0A0A6YYJ2	146 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	ARHGAP10	A1A4S6	786 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	GOLGA8K	D6RF30	607 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	GOLGA8T	H3BQL2	631 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	NIPSNAP2	O75323	286 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	JRK	O75564	520 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	MATN4	O95460	622 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	CELA2A	P08217	269 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	STS	P08842	583 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	PRR35	P0CG20	571 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	ERVK-10	P10266	1014 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	PRF1	P14222	555 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	ARNT	P27540	789 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	TNFRSF8	P28908	595 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	CMPK1	P30085	196 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	FMO4	P31512	558 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	SOX11	P35716	441 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	EEF1A2	Q05639	463 aa	Known RBP	14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	KCTD19	Q17RG1	926 aa	Predicted RBP	14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	PRTG	Q2VWP7	1150 aa		14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	14.68	□□□□□ -0.06
RFX2-223	ENST00000592883	FAAH2	Q6GMR7	532 aa		14.68	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms